Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0621.Seq
(449 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 130 5e-31
03_01_0547 + 4093196-4093657,4094267-4095148 130 5e-31
03_01_0544 + 4082528-4082989,4083585-4084466 130 5e-31
03_01_0543 + 4076981-4077442,4078145-4079026 130 5e-31
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 80 9e-16
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 80 9e-16
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 64 7e-11
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 62 2e-10
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 58 3e-09
02_04_0462 + 23131433-23132836 50 9e-07
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 46 1e-05
03_05_0511 + 25056018-25059107 32 0.24
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.32
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.43
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.43
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 31 0.57
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 31 0.57
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.75
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 30 0.75
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 30 0.99
02_04_0148 - 20198407-20201424 30 0.99
01_06_0662 + 30987187-30987277,30987825-30990214 30 0.99
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 29 1.3
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 29 1.3
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 29 1.7
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 28 3.0
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 28 4.0
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 28 4.0
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 4.0
07_01_1023 + 8840754-8842988,8843189-8843362 27 5.3
04_04_1139 + 31173271-31173462,31173928-31174087,31174318-311744... 27 5.3
06_03_1457 - 30287185-30287287,30287691-30287759,30288212-302883... 27 7.0
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 27 9.2
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 27 9.2
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 27 9.2
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR +FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 107 bits (258), Expect = 3e-24
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFET+ YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ TG AG SK+G
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR +FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 107 bits (258), Expect = 3e-24
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFET+ YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ TG AG SK+G
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR +FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 107 bits (258), Expect = 3e-24
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFET+ YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ TG AG SK+G
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 130 bits (314), Expect = 5e-31
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEKTHINIVVIGHVDSGKSTTTGHLIYK GGIDKR +FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 107 bits (258), Expect = 3e-24
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFET+ YY T+IDAPGHRDFIKNMITGTSQADCAVLI+ TG AG SK+G
Sbjct: 73 IDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 79.8 bits (188), Expect = 9e-16
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 56 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKA 235
+ +N+ ++GHVDSGKST +G L++ G I K+ K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 236 ERER 247
ERER
Sbjct: 306 ERER 309
Score = 61.3 bits (142), Expect = 3e-10
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +1
Query: 262 IALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNG 432
+A+ ET Y V ++D+PGH+DF+ NMI+G +QAD A+L+V TG AG G
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 79.8 bits (188), Expect = 9e-16
Identities = 34/64 (53%), Positives = 46/64 (71%)
Frame = +2
Query: 56 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKA 235
+ +N+ ++GHVDSGKST +G L++ G I K+ K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 236 ERER 247
ERER
Sbjct: 306 ERER 309
Score = 61.3 bits (142), Expect = 3e-10
Identities = 26/57 (45%), Positives = 37/57 (64%)
Frame = +1
Query: 262 IALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNG 432
+A+ ET Y V ++D+PGH+DF+ NMI+G +QAD A+L+V TG AG G
Sbjct: 315 VAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 63.7 bits (148), Expect = 7e-11
Identities = 27/64 (42%), Positives = 38/64 (59%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
+++ FET TI+DAPGH+ ++ NMI+G SQAD VL++ GE G + G
Sbjct: 19 VEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQ 78
Query: 436 XREH 447
REH
Sbjct: 79 TREH 82
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 62.1 bits (144), Expect = 2e-10
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +1
Query: 277 FETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNG 432
F+T Y+V ++D+PGH+DF+ NMI+G +Q+D A+L++ G AG NG
Sbjct: 307 FDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGING 358
Score = 33.5 bits (73), Expect = 0.080
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2
Query: 185 MGKGSFKYAWVLDKLKAERER 247
+GKGSF YAW +D+ ERER
Sbjct: 276 IGKGSFAYAWAMDESADERER 296
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAP----GHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXS 423
+++ FET TI+DAP GH+ ++ NMI+G SQAD VL++ GE G
Sbjct: 60 VEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 119
Query: 424 KNGXXREH 447
K G REH
Sbjct: 120 KGGQTREH 127
Score = 48.0 bits (109), Expect = 3e-06
Identities = 20/51 (39%), Positives = 34/51 (66%)
Frame = +2
Query: 89 DSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAER 241
D+GKST G +++ G +D RT K+EKEA++ + S+ A+++D + ER
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEER 54
>02_04_0462 + 23131433-23132836
Length = 467
Score = 50.0 bits (114), Expect = 9e-07
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
I+ A ++ET + +D PGH D++KNMITG +Q D A+L+V G
Sbjct: 121 INTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 169
Score = 36.3 bits (80), Expect = 0.011
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 38 KMGKEKTHINIVVIGHVDSGKSTTTGHL---IYKCGGIDKRTXXKFEKEAQEMGKG 196
K + K H+NI IGHVD GK+T T L + GG + + + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 46.4 bits (105), Expect = 1e-05
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +1
Query: 274 KFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
++ET+ + +D PGH D++KNMITG +Q D +L+V G
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDG 166
Score = 33.1 bits (72), Expect = 0.11
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +2
Query: 47 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTXXKFEKEAQEMGKG 196
+ K H+N+ IGHVD GK+T T ++ + G + +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.24
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 29.1 bits (62), Expect = 1.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
V +ID+PGH DF + + +D A+++V
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILV 106
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.32
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCG 136
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
+ ++D PGH DF + + AVL+V G G
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEG 159
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.43
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 14 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 136
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
Y + +ID+PGH DF + D A+++V
Sbjct: 98 YLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.43
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 14 QFVIRD*PKMGKEKTHI-NIVVIGHVDSGKSTTTGHLIYKCG 136
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
Y + +ID+PGH DF + D A+++V
Sbjct: 98 YLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 30.7 bits (66), Expect = 0.57
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
Y I+D PGH +F M AD AVL+V G
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 30.7 bits (66), Expect = 0.57
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 59 HINIVVIGHVDSGKSTTTGHLIYKCG 136
HI+ V++ H+D+GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.75
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
Score = 29.9 bits (64), Expect = 0.99
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +1
Query: 247 WYQI-DIALWKFET----SXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+Y++ D AL FE + Y + +ID+PGH DF + D A+++V
Sbjct: 78 YYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGALVVV 129
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.3 bits (65), Expect = 0.75
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH+ F G+S D A+L+V
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILVV 516
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 29.9 bits (64), Expect = 0.99
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVLDKLKAERE 244
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 245 R 247
R
Sbjct: 103 R 103
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
Y + +ID PGH DF + + A+L+V G
Sbjct: 134 YLLNLIDTPGHVDFSYEVSRSLAACQGALLVVDAAQG 170
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.9 bits (64), Expect = 0.99
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
V +ID+PGH DF + AD A+++V G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEM 187
N ++ HVD GK++ HLI G ++R + A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 0.99
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 136
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
Y + +ID+PGH DF + D A+++V
Sbjct: 98 YLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH F G+S D A+L+V
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILVV 793
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 29.5 bits (63), Expect = 1.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGI 142
NI + H+DSGK+T T ++Y G I
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTGRI 95
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
Y V IID PGH DF + D A+L++
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVL 167
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 65 NIVVIGHVDSGKSTTTGHLIYKCGGIDKR 151
N +I H+D GKST L+ G + KR
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKR 107
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 292 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
Y + +ID PGH DF + + + A+L+V G
Sbjct: 143 YCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 179
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH F G S D AV++V
Sbjct: 507 VIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +1
Query: 295 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 387
+V+ +D PGH + M+ G + D A+L++
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLI 179
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 27.9 bits (59), Expect = 4.0
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
+T +D PGH F G + D VL+V G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 4.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 53 KTHINIVVIGHVDSG 97
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 375 SAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDLI 250
S+IS G C+ + S N+ N +S +LPE ID I
Sbjct: 138 SSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNI 179
>04_04_1139 +
31173271-31173462,31173928-31174087,31174318-31174487,
31174566-31174788,31175053-31175207
Length = 299
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 163 VREGGPGNG*RILQICLGIGQTKG*A*AWYQIDIALWK 276
+++GGPG G + + I T AWYQI ++ K
Sbjct: 137 LKKGGPGKGPSTGGVIINISATLHYTAAWYQIHVSAAK 174
>06_03_1457 -
30287185-30287287,30287691-30287759,30288212-30288351,
30288447-30288641,30288743-30289363,30289688-30290257,
30290332-30293638,30293764-30293863,30293978-30295014,
30295256-30295604,30296299-30296374,30296456-30297022,
30297094-30297238,30298281-30298405,30298491-30298582,
30298646-30298828,30298946-30299058,30299499-30299649,
30299720-30299882
Length = 2701
Score = 27.1 bits (57), Expect = 7.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -1
Query: 335 MKSLCPGASMMVT*YXLVSNFQRAISI*YHAHAQPLVCPIPKHI*RILYP 186
+ S CPG + +T +V+ FQRA+ + Q +C K I + P
Sbjct: 291 LHSSCPGYIVAITASDIVNVFQRAVHTSRSSELQVAMCNAYKRIVELCSP 340
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 369 ISLRGSCDHVLDEISVSRSINDGNIVLA 286
I LRG+ +HVLDE RS++D VL+
Sbjct: 343 IVLRGASEHVLDE--AERSLHDALCVLS 368
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 26.6 bits (56), Expect = 9.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 369 ISLRGSCDHVLDEISVSRSINDGNIVLA 286
I LRG+ +HVLDE RS++D VL+
Sbjct: 366 IVLRGASEHVLDE--AERSLHDALCVLS 391
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 304 IIDAPGHRDFIKNMITGTSQADCAVLIV 387
+ID PGH F G+ D A+L+V
Sbjct: 417 LIDTPGHETFRNFRCIGSRLCDIAILVV 444
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,791,681
Number of Sequences: 37544
Number of extensions: 196997
Number of successful extensions: 474
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -