Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0621.Seq
(449 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 143 9e-37
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 143 9e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 120 1e-29
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 118 3e-29
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 29 0.023
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.67
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 1.5
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 2.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 2.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 2.7
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 21 8.2
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 143 bits (346), Expect = 9e-37
Identities = 66/69 (95%), Positives = 66/69 (95%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 116 bits (279), Expect = 1e-28
Identities = 54/64 (84%), Positives = 55/64 (85%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFET+ YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV G GE AG SKNG
Sbjct: 73 IDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 143 bits (346), Expect = 9e-37
Identities = 66/69 (95%), Positives = 66/69 (95%)
Frame = +2
Query: 41 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTXXKFEKEAQEMGKGSFKYAWVL 220
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRT KFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 221 DKLKAERER 247
DKLKAERER
Sbjct: 61 DKLKAERER 69
Score = 120 bits (288), Expect = 1e-29
Identities = 56/64 (87%), Positives = 56/64 (87%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFETS YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV GTGE AG SKNG
Sbjct: 73 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 132
Query: 436 XREH 447
REH
Sbjct: 133 TREH 136
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 120 bits (288), Expect = 1e-29
Identities = 56/64 (87%), Positives = 56/64 (87%)
Frame = +1
Query: 256 IDIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGX 435
IDIALWKFETS YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV GTGE AG SKNG
Sbjct: 16 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQ 75
Query: 436 XREH 447
REH
Sbjct: 76 TREH 79
Score = 29.5 bits (63), Expect = 0.018
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +2
Query: 212 WVLDKLKAERER 247
WVLDKLKAERER
Sbjct: 1 WVLDKLKAERER 12
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 118 bits (284), Expect = 3e-29
Identities = 55/63 (87%), Positives = 55/63 (87%)
Frame = +1
Query: 259 DIALWKFETSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTGEXXAGXSKNGXX 438
DIALWKFETS YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV GTGE AG SKNG
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 439 REH 447
REH
Sbjct: 61 REH 63
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 29.1 bits (62), Expect = 0.023
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 298 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXXGTG 402
VT +D PGH FI G D VL+V G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.29
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 53 KTHINIVVIGHVDSGKST 106
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.67
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 62 INIVVIGHVDSGKST 106
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 54 FSLPIFG*SRITNCV*Y 4
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 143 DKRTXXKFEKEAQEMG 190
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 143 DKRTXXKFEKEAQEMG 190
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 22.2 bits (45), Expect = 2.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 143 DKRTXXKFEKEAQEMG 190
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 20.6 bits (41), Expect = 8.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 283 TSXYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 384
T YY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,712
Number of Sequences: 438
Number of extensions: 2044
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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