Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0620.Seq
(487 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A0NDG7 Cluster: ENSANGP00000030449; n=2; Diptera|Rep: E... 64 2e-09
UniRef50_Q9VF05 Cluster: CG5516-PA; n=2; Endopterygota|Rep: CG55... 62 5e-09
UniRef50_UPI00015B5C23 Cluster: PREDICTED: similar to zinc finge... 56 6e-07
UniRef50_Q8TBK6 Cluster: Zinc finger CCHC domain-containing prot... 53 4e-06
UniRef50_A7T6T1 Cluster: Predicted protein; n=1; Nematostella ve... 43 0.003
UniRef50_Q9FGX7 Cluster: Similarity to unknown protein; n=5; Mag... 39 0.052
UniRef50_Q55V50 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_Q54C90 Cluster: Putative uncharacterized protein; n=1; ... 38 0.16
UniRef50_A0E2U0 Cluster: Chromosome undetermined scaffold_75, wh... 37 0.28
UniRef50_UPI00006CB052 Cluster: hypothetical protein TTHERM_0023... 36 0.64
UniRef50_Q868S9 Cluster: Gag-like protein; n=1; Anopheles gambia... 35 0.85
UniRef50_Q0US55 Cluster: Putative uncharacterized protein; n=2; ... 35 1.1
UniRef50_Q8MY21 Cluster: Gag-like protein; n=2; Forficula scudde... 34 2.0
UniRef50_Q55AJ7 Cluster: Putative uncharacterized protein; n=2; ... 33 3.4
UniRef50_A2QQ15 Cluster: Similarity: the predicted ORF may be N-... 33 4.5
UniRef50_Q4BYJ7 Cluster: Putative uncharacterized protein precur... 32 6.0
UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2; ... 32 6.0
UniRef50_UPI00015B472C Cluster: PREDICTED: similar to copia-like... 32 7.9
UniRef50_Q7QEY0 Cluster: ENSANGP00000012809; n=1; Anopheles gamb... 32 7.9
UniRef50_Q57US0 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
>UniRef50_A0NDG7 Cluster: ENSANGP00000030449; n=2; Diptera|Rep:
ENSANGP00000030449 - Anopheles gambiae str. PEST
Length = 252
Score = 64.1 bits (149), Expect = 2e-09
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +1
Query: 142 AERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRK 252
A ++K+ FP+GIRCQKCLEFGHWSYEC+GKRK
Sbjct: 9 ALKQKEAKLAAAFPKGIRCQKCLEFGHWSYECQGKRK 45
>UniRef50_Q9VF05 Cluster: CG5516-PA; n=2; Endopterygota|Rep:
CG5516-PA - Drosophila melanogaster (Fruit fly)
Length = 176
Score = 62.5 bits (145), Expect = 5e-09
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRK 252
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK KRK
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRK 48
>UniRef50_UPI00015B5C23 Cluster: PREDICTED: similar to zinc finger,
CCHC domain containing 10; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to zinc finger, CCHC domain
containing 10 - Nasonia vitripennis
Length = 159
Score = 55.6 bits (128), Expect = 6e-07
Identities = 28/63 (44%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +1
Query: 190 IRCQKCLEFGHWSYECKGKRKI*FVLHVHESCIRI-----*KPKKKVNAAMAAARYPTRK 354
+RCQKCLE GHWSYECKGKRK LH + +++ KP+ + N + PT K
Sbjct: 23 VRCQKCLEMGHWSYECKGKRK---YLHRNSRTVQLKKALEKKPEDRFNNEASNTEEPTNK 79
Query: 355 SVK 363
K
Sbjct: 80 KSK 82
>UniRef50_Q8TBK6 Cluster: Zinc finger CCHC domain-containing protein
10; n=35; Euteleostomi|Rep: Zinc finger CCHC
domain-containing protein 10 - Homo sapiens (Human)
Length = 192
Score = 52.8 bits (121), Expect = 4e-06
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = +1
Query: 184 QGIRCQKCLEFGHWSYECKGKRK 252
Q +RCQKCLEFGHW+YEC GKRK
Sbjct: 41 QHVRCQKCLEFGHWTYECTGKRK 63
>UniRef50_A7T6T1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 55
Score = 43.2 bits (97), Expect = 0.003
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = +1
Query: 193 RCQKCLEFGHWSYECKGKRK 252
+CQKCL+ GHW+YEC KRK
Sbjct: 6 KCQKCLQIGHWTYECTNKRK 25
>UniRef50_Q9FGX7 Cluster: Similarity to unknown protein; n=5;
Magnoliophyta|Rep: Similarity to unknown protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 280
Score = 39.1 bits (87), Expect = 0.052
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 193 RCQKCLEFGHWSYECKGKR 249
+CQKC + GHW+YECK +R
Sbjct: 104 QCQKCFQAGHWTYECKNER 122
>UniRef50_Q55V50 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 217
Score = 37.9 bits (84), Expect = 0.12
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +1
Query: 193 RCQKCLEFGHWSYECK 240
RCQKCL+FGH++Y+CK
Sbjct: 20 RCQKCLKFGHYTYQCK 35
>UniRef50_Q54C90 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 204
Score = 37.5 bits (83), Expect = 0.16
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1
Query: 196 CQKCLEFGHWSYECKGK 246
CQKCL+FGH S+ECK K
Sbjct: 9 CQKCLQFGHLSFECKSK 25
>UniRef50_A0E2U0 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 36.7 bits (81), Expect = 0.28
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 190 IRCQKCLEFGHWSYECKGK 246
+RCQ+CL++GH +YECK +
Sbjct: 35 VRCQRCLKYGHLTYECKNE 53
>UniRef50_UPI00006CB052 Cluster: hypothetical protein
TTHERM_00239330; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00239330 - Tetrahymena
thermophila SB210
Length = 364
Score = 35.5 bits (78), Expect = 0.64
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +1
Query: 184 QGIRCQKCLEFGHWSYECKGK 246
+ RCQKCL+ GH++YEC+ +
Sbjct: 22 ENYRCQKCLKLGHFTYECQNQ 42
>UniRef50_Q868S9 Cluster: Gag-like protein; n=1; Anopheles
gambiae|Rep: Gag-like protein - Anopheles gambiae
(African malaria mosquito)
Length = 724
Score = 35.1 bits (77), Expect = 0.85
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +1
Query: 190 IRCQKCLEFGHWSYECK 240
+RC +CLE GHW+++C+
Sbjct: 660 VRCYRCLELGHWAHDCR 676
>UniRef50_Q0US55 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 342
Score = 34.7 bits (76), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 196 CQKCLEFGHWSYECK 240
CQKCL+ GH+SYECK
Sbjct: 18 CQKCLKRGHYSYECK 32
>UniRef50_Q8MY21 Cluster: Gag-like protein; n=2; Forficula
scudderi|Rep: Gag-like protein - Forficula scudderi
Length = 148
Score = 33.9 bits (74), Expect = 2.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 193 RCQKCLEFGHWSYECKGKRK 252
+C KC FGH SYEC+G +
Sbjct: 66 KCYKCQNFGHMSYECEGNNE 85
>UniRef50_Q55AJ7 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 772
Score = 33.1 bits (72), Expect = 3.4
Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 106 LNMTLGTYNRHQAERKKQXXXXXXF--PQGIRCQKCLEFGHWSYEC 237
+N+ G N + +RK+Q + + I+C++C + H+S+EC
Sbjct: 244 INVKYGNDNNNNNKRKRQSVTTSRYYMEESIKCERCGDHDHFSFEC 289
>UniRef50_A2QQ15 Cluster: Similarity: the predicted ORF may be
N-terminally too short; n=5; Trichocomaceae|Rep:
Similarity: the predicted ORF may be N-terminally too
short - Aspergillus niger
Length = 301
Score = 32.7 bits (71), Expect = 4.5
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 196 CQKCLEFGHWSYEC 237
CQKCL+ GH+SYEC
Sbjct: 22 CQKCLKRGHYSYEC 35
>UniRef50_Q4BYJ7 Cluster: Putative uncharacterized protein
precursor; n=2; Chroococcales|Rep: Putative
uncharacterized protein precursor - Crocosphaera
watsonii
Length = 147
Score = 32.3 bits (70), Expect = 6.0
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = -2
Query: 186 LRKSSSQSCLLFPLSLMPVICSQSHIQNLKGKINK 82
+RK S++ CLLFPLSL+ V+ + I + KI++
Sbjct: 1 MRKYSTKKCLLFPLSLLSVLVNLLLISCAENKISQ 35
>UniRef50_O76743 Cluster: ATP-dependent RNA helicase glh-4; n=2;
Caenorhabditis|Rep: ATP-dependent RNA helicase glh-4 -
Caenorhabditis elegans
Length = 1156
Score = 32.3 bits (70), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +1
Query: 196 CQKCLEFGHWSYECKGKRK 252
C++C E GHW YEC + K
Sbjct: 667 CRRCAEEGHWGYECPTRPK 685
>UniRef50_UPI00015B472C Cluster: PREDICTED: similar to copia-like
retrotransposable element; n=2; Nasonia vitripennis|Rep:
PREDICTED: similar to copia-like retrotransposable
element - Nasonia vitripennis
Length = 1441
Score = 31.9 bits (69), Expect = 7.9
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 121 GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYEC 237
G Y+R + R+ +RC C EFGH++ +C
Sbjct: 224 GNYHRTRGSRQSAAPSSRNPATNVRCYNCNEFGHYANKC 262
>UniRef50_Q7QEY0 Cluster: ENSANGP00000012809; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000012809 - Anopheles gambiae
str. PEST
Length = 393
Score = 31.9 bits (69), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 181 PQGIRCQKCLEFGHWSYECKG 243
P +RC +C+E GH S EC G
Sbjct: 322 PDEVRCYRCMERGHTSRECTG 342
>UniRef50_Q57US0 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 144
Score = 31.9 bits (69), Expect = 7.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 196 CQKCLEFGHWSYECKG 243
CQKC HW++ECKG
Sbjct: 27 CQKCGSKAHWTFECKG 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,234,411
Number of Sequences: 1657284
Number of extensions: 5945772
Number of successful extensions: 16836
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 16040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16824
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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