Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0620.Seq
(487 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p pro... 62 3e-10
AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA... 62 3e-10
M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1 ... 29 2.6
AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like pro... 29 3.4
AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown prot... 28 5.9
AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA... 28 5.9
BT021283-1|AAX33431.1| 1272|Drosophila melanogaster RE34808p pro... 28 7.8
AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi... 28 7.8
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA... 28 7.8
AE014134-3594|AAF45346.2| 1272|Drosophila melanogaster CG17018-P... 28 7.8
AE014134-3593|AAN10334.2| 1305|Drosophila melanogaster CG17018-P... 28 7.8
AE014134-3592|AAN10333.2| 1294|Drosophila melanogaster CG17018-P... 28 7.8
>AY071154-1|AAL48776.1| 176|Drosophila melanogaster RE18415p
protein.
Length = 176
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRK 252
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK KRK
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRK 48
>AE014297-2125|AAF55257.1| 176|Drosophila melanogaster CG5516-PA
protein.
Length = 176
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/48 (58%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Frame = +1
Query: 112 MTL-GTYNRHQAERKKQXXXXXXFPQGIRCQKCLEFGHWSYECKGKRK 252
MTL G R A++K+ FP GIRCQKCL+ GHWSYECK KRK
Sbjct: 1 MTLVGLAARKLAQKKRSAKQAADFPNGIRCQKCLQIGHWSYECKEKRK 48
>M14954-1|AAA70221.1| 426|Drosophila melanogaster putative ORF1
protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1
Query: 181 PQGIRCQKCLEFGHWSYECK 240
P +RC+KCL FGH + CK
Sbjct: 183 PLPLRCKKCLRFGHPTPICK 202
>AJ278684-1|CAB99191.1| 488|Drosophila melanogaster gag-like
protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 190 IRCQKCLEFGHWSYECK 240
IRC +CLEFGH + CK
Sbjct: 407 IRCFRCLEFGHRAPYCK 423
>AF132177-1|AAD34765.1| 1231|Drosophila melanogaster unknown
protein.
Length = 1231
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 181 PQGIRCQKCLEFGHWSYEC 237
P RC KC + GHW C
Sbjct: 148 PASYRCNKCKKSGHWIKNC 166
>AE013599-3813|AAF47162.1| 1231|Drosophila melanogaster CG3231-PA
protein.
Length = 1231
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 181 PQGIRCQKCLEFGHWSYEC 237
P RC KC + GHW C
Sbjct: 148 PASYRCNKCKKSGHWIKNC 166
>BT021283-1|AAX33431.1| 1272|Drosophila melanogaster RE34808p
protein.
Length = 1272
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 192 YALRKSSSQSCLLFPLSLMPVICSQSHIQNLKG 94
Y +S S S FP++ P+I S +HIQ+ +G
Sbjct: 92 YYNNRSYSASTTGFPIASTPLISSHAHIQDQQG 124
>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
ubiquitin-conjugatingenzyme protein.
Length = 4876
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 258 LDLAFALALIAPVSKLQALLASYALRKSSSQSCLLFPLSLMPVICS--QSHIQNLKGKIN 85
L F +A + P SKL L+A+Y L++MP+I S Q H++ + K++
Sbjct: 3308 LSRCFHVAALQPDSKLADLIAAYPAAYPGFLEACCSLLNIMPMIPSLAQQHLETILLKLS 3367
>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
protein.
Length = 4876
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -2
Query: 258 LDLAFALALIAPVSKLQALLASYALRKSSSQSCLLFPLSLMPVICS--QSHIQNLKGKIN 85
L F +A + P SKL L+A+Y L++MP+I S Q H++ + K++
Sbjct: 3308 LSRCFHVAALQPDSKLADLIAAYPAAYPGFLEACCSLLNIMPMIPSLAQQHLETILLKLS 3367
>AE014134-3594|AAF45346.2| 1272|Drosophila melanogaster CG17018-PA,
isoform A protein.
Length = 1272
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 192 YALRKSSSQSCLLFPLSLMPVICSQSHIQNLKG 94
Y +S S S FP++ P+I S +HIQ+ +G
Sbjct: 92 YYNNRSYSASTTGFPIASTPLISSHAHIQDQQG 124
>AE014134-3593|AAN10334.2| 1305|Drosophila melanogaster CG17018-PD,
isoform D protein.
Length = 1305
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 192 YALRKSSSQSCLLFPLSLMPVICSQSHIQNLKG 94
Y +S S S FP++ P+I S +HIQ+ +G
Sbjct: 125 YYNNRSYSASTTGFPIASTPLISSHAHIQDQQG 157
>AE014134-3592|AAN10333.2| 1294|Drosophila melanogaster CG17018-PC,
isoform C protein.
Length = 1294
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 192 YALRKSSSQSCLLFPLSLMPVICSQSHIQNLKG 94
Y +S S S FP++ P+I S +HIQ+ +G
Sbjct: 114 YYNNRSYSASTTGFPIASTPLISSHAHIQDQQG 146
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,407,452
Number of Sequences: 53049
Number of extensions: 301297
Number of successful extensions: 1359
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1356
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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