Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0619.Seq
(490 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 140 2e-33
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 140 2e-33
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 140 2e-33
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 140 2e-33
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 52 1e-06
BC036305-1|AAH36305.1| 530|Homo sapiens GMEB2 protein protein. 29 6.5
AL353715-2|CAI17956.1| 530|Homo sapiens glucocorticoid modulato... 29 6.5
AL353715-1|CAI17955.1| 479|Homo sapiens glucocorticoid modulato... 29 6.5
AL133646-1|CAB63765.1| 505|Homo sapiens hypothetical protein pr... 29 6.5
AL121907-2|CAI22265.1| 530|Homo sapiens glucocorticoid modulato... 29 6.5
AL121907-1|CAI22264.1| 479|Homo sapiens glucocorticoid modulato... 29 6.5
AF173867-1|AAD51351.1| 530|Homo sapiens DNA binding protein p79... 29 6.5
AB033095-1|BAA86583.1| 531|Homo sapiens KIAA1269 protein protein. 29 6.5
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 62 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 121
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 122 VVAGGGRIDKPILKAGRAY 140
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 138 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 194
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 140 bits (340), Expect = 2e-33
Identities = 64/79 (81%), Positives = 73/79 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 311
PEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG
Sbjct: 108 PEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVG 167
Query: 310 IVAGGGRIDKPILKAGRAY 254
+VAGGGRIDKPILKAGRAY
Sbjct: 168 VVAGGGRIDKPILKAGRAY 186
Score = 105 bits (253), Expect = 6e-23
Identities = 45/57 (78%), Positives = 48/57 (84%)
Frame = -3
Query: 263 KGIHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 93
+ HKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 184 RAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 52.0 bits (119), Expect = 1e-06
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1
Query: 490 PEGTIVCNLEEKMGDRGRLARASGNFA 410
PEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 104 PEGTIVCCLEEKPGDRGKLARASGNYA 130
>BC036305-1|AAH36305.1| 530|Homo sapiens GMEB2 protein protein.
Length = 530
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 401 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 439
>AL353715-2|CAI17956.1| 530|Homo sapiens glucocorticoid modulatory
element binding proteiniae) protein.
Length = 530
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 401 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 439
>AL353715-1|CAI17955.1| 479|Homo sapiens glucocorticoid modulatory
element binding proteiniae) protein.
Length = 479
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 350 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 388
>AL133646-1|CAB63765.1| 505|Homo sapiens hypothetical protein
protein.
Length = 505
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 376 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 414
>AL121907-2|CAI22265.1| 530|Homo sapiens glucocorticoid modulatory
element binding protein; translocated to, 2 protein.
Length = 530
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 401 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 439
>AL121907-1|CAI22264.1| 479|Homo sapiens glucocorticoid modulatory
element binding proteinge factor 2 (brefeldin A-inhib
protein.
Length = 479
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 350 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 388
>AF173867-1|AAD51351.1| 530|Homo sapiens DNA binding protein p79PIF
protein.
Length = 530
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 401 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 439
>AB033095-1|BAA86583.1| 531|Homo sapiens KIAA1269 protein protein.
Length = 531
Score = 29.5 bits (63), Expect = 6.5
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 249 LVYALPAFKIGL-SIRPPPATIPTMPLLLDGRTFLAPDGS 365
+V LP+ +G S++ PPA+ P P LL G T LA GS
Sbjct: 402 VVSTLPSTVLGKGSLQAPPASSPASP-LLGGYTVLASSGS 440
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,558,303
Number of Sequences: 237096
Number of extensions: 1774422
Number of successful extensions: 4479
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4479
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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