Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0618.Seq
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   4.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   5.5  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   7.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   7.3  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   9.6  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -3

Query: 100 SQRAAPPPLLLFIVKRIFYKEMENK 26
           S R+APPP+ +F+  +  Y  ++++
Sbjct: 556 SYRSAPPPVEIFVRAQFDYDPLDDE 580


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +3

Query: 225 GEPHAALVGDSYTPPSASVCSPRVPR 302
           GE  A+ VGD   P   SV    VPR
Sbjct: 269 GEQPASSVGDPANPQQPSVIFSPVPR 294


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 120 FRGGRALVSGP 88
           FRG RA++SGP
Sbjct: 285 FRGARAILSGP 295


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 120 FRGGRALVSGP 88
           FRG RA++SGP
Sbjct: 285 FRGARAILSGP 295


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 171 REVSVGAAASRLCIYLSF 118
           REV      SRLCIY+ F
Sbjct: 114 REVQQPPRLSRLCIYVVF 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 359,494
Number of Sequences: 2352
Number of extensions: 5358
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)