Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0617.Seq
(489 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 1.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 1.7
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 23 1.7
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 2.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 3.1
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 3.1
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 3.1
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 3.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 4.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 5.3
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 5.3
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.3
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 9.3
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 53 SSASNSRHQEQTPYKYTESINYVTESIPQKHYTEIYKMNP 172
S+ + ++ EQT + ++NYV + + KH NP
Sbjct: 41 SNNKSKKYFEQTLNELNFNLNYVNKGVTYKHTIIEMDSNP 80
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.0 bits (47), Expect = 1.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 158 YKMNPSESEQRIVNKQINFDD 220
Y + S Q+IVN NFDD
Sbjct: 375 YMLVLSNRMQKIVNDDFNFDD 395
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 23.0 bits (47), Expect = 1.7
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +2
Query: 5 EEANHLFKANVQYIDQSSAS-NSRH---QEQTPYKYTESINYVTESIPQKHYTEI 157
+ A H++ ++++ I + N H + PY + E I+Y E+I ++ Y I
Sbjct: 207 DAAKHMWPSDLRTIYSRVRNLNRTHGFPNDAQPYIFQEVIDYGNEAISKREYNGI 261
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 2.3
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +2
Query: 110 INYVTESIPQKHYTEIYKMNPSESEQRIVNKQINFDDALETELADSDTIQKIVFQRRVLC 289
I Y T + + H T KM PS +V+ ++ +AD+ +++ V
Sbjct: 535 IQYNTRA--ENHQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVADASVQPQVISGNPVAS 592
Query: 290 QNLL 301
N++
Sbjct: 593 VNMV 596
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 95 KYTESINYVTESIPQKHYTEIYKMNPSESEQRIVNKQINFDD 220
K E++ +V I ++ Y + S Q++VN NFDD
Sbjct: 358 KIKEALPHVP--IFDRYINREYILVLSNKMQKMVNNDFNFDD 397
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 158 YKMNPSESEQRIVNKQINFDD 220
Y + S Q+IVN NFD+
Sbjct: 378 YMLALSNRMQKIVNNDFNFDE 398
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 95 KYTESINYVTESIPQKHYTEIYKMNPSESEQRIVNKQINFDD 220
K E++ +V I ++ Y + S Q++VN NFDD
Sbjct: 358 KIKEALPHVP--IFDRYINREYILVLSNKMQKMVNNDFNFDD 397
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 3.1
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 95 KYTESINYVTESIPQKHYTEIYKMNPSESEQRIVNKQINFDD 220
K E++ +V I ++ Y + S Q++VN NFDD
Sbjct: 358 KIKEALPHVP--IFDRYINREYILVLSNKMQKMVNNDFNFDD 397
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 4.0
Identities = 9/45 (20%), Positives = 20/45 (44%)
Frame = +1
Query: 223 IRDRASRFRYDTENSFSEAGFMPKPLNLREEQDFYGSFTNNVPKV 357
+ D S+ YD + S + + + + + Q + + +PKV
Sbjct: 285 VLDLRSQLEYDLQTSIMSRHYSTRAIVIEKGQSIWDYDSTYIPKV 329
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 5.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 158 YKMNPSESEQRIVNKQINFDD 220
Y + S Q+I+N NF+D
Sbjct: 380 YMLALSNRMQKIINNDFNFND 400
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 5.3
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -2
Query: 101 YICMVFALGVDCLMHCFDQ 45
Y+ + LG+ C ++C+ Q
Sbjct: 202 YVPCIVMLGIYCRLYCYAQ 220
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 87 HHTNIPKALTTLQNQYHRNITQKYTK*ILRKVNKE 191
H TN+ ++L + + QY + Q RK+ +E
Sbjct: 373 HATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRE 407
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 87 HHTNIPKALTTLQNQYHRNITQKYTK*ILRKVNKE 191
H TN+ ++L + + QY + Q RK+ +E
Sbjct: 341 HATNLIQSLDSSRRQYREKVKQVEEYMAYRKLPRE 375
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +3
Query: 441 IPRTTLYGKC 470
IP TLYG+C
Sbjct: 548 IPTGTLYGRC 557
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,667
Number of Sequences: 438
Number of extensions: 2826
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -