Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0616.Seq
(488 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 159 2e-39
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 159 2e-39
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 159 2e-39
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 92 3e-19
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 92 3e-19
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 92 3e-19
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 92 3e-19
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 92 3e-19
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 38 0.007
AY119526-1|AAM50180.1| 447|Drosophila melanogaster GH16240p pro... 31 0.64
AF097364-1|AAC71035.1| 530|Drosophila melanogaster Drongo protein. 31 0.64
AE014134-166|AAN10487.1| 447|Drosophila melanogaster CG3365-PC,... 31 0.64
AE014134-165|AAF51448.2| 532|Drosophila melanogaster CG3365-PA,... 31 0.64
AE014134-164|AAF51447.2| 602|Drosophila melanogaster CG3365-PB,... 31 0.64
AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein ... 28 6.0
AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p pro... 28 6.0
AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB... 28 6.0
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 159 bits (386), Expect = 2e-39
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 3/117 (2%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWI--RQAEWTTYTNHFQQLVEKRLHK-HNXICVEDLI 202
IAEPYI WGYPNLKSVREL+ + T++F ++E++L + H CVEDL+
Sbjct: 125 IAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNF--VIERKLRQAHQIQCVEDLV 182
Query: 201 HEIFTVGEKFKYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLXRMV 31
HEIFTVG FKYASNFLWPFKLN PTGGWRKK HYV+GGDFGNRED+IN LL +MV
Sbjct: 183 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 239
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = -2
Query: 487 GINQVSXKVRKVQQLFRLRQINNGVFVRLNKATVNMLRYRRALHCLGIPQLK 332
GIN+V+ KVRKV QLFRLRQINNGVF++LNKAT+NMLR G P LK
Sbjct: 87 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLK 138
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 159 bits (386), Expect = 2e-39
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 3/117 (2%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWI--RQAEWTTYTNHFQQLVEKRLHK-HNXICVEDLI 202
IAEPYI WGYPNLKSVREL+ + T++F ++E++L + H CVEDL+
Sbjct: 138 IAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNF--VIERKLRQAHQIQCVEDLV 195
Query: 201 HEIFTVGEKFKYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLXRMV 31
HEIFTVG FKYASNFLWPFKLN PTGGWRKK HYV+GGDFGNRED+IN LL +MV
Sbjct: 196 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 252
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = -2
Query: 487 GINQVSXKVRKVQQLFRLRQINNGVFVRLNKATVNMLRYRRALHCLGIPQLK 332
GIN+V+ KVRKV QLFRLRQINNGVF++LNKAT+NMLR G P LK
Sbjct: 100 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLK 151
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 159 bits (386), Expect = 2e-39
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 3/117 (2%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWI--RQAEWTTYTNHFQQLVEKRLHK-HNXICVEDLI 202
IAEPYI WGYPNLKSVREL+ + T++F ++E++L + H CVEDL+
Sbjct: 138 IAEPYITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNF--VIERKLRQAHQIQCVEDLV 195
Query: 201 HEIFTVGEKFKYASNFLWPFKLNNPTGGWRKKTIHYVDGGDFGNREDKINDLLXRMV 31
HEIFTVG FKYASNFLWPFKLN PTGGWRKK HYV+GGDFGNRED+IN LL +MV
Sbjct: 196 HEIFTVGPNFKYASNFLWPFKLNTPTGGWRKKANHYVNGGDFGNREDQINRLLRKMV 252
Score = 72.9 bits (171), Expect = 2e-13
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = -2
Query: 487 GINQVSXKVRKVQQLFRLRQINNGVFVRLNKATVNMLRYRRALHCLGIPQLK 332
GIN+V+ KVRKV QLFRLRQINNGVF++LNKAT+NMLR G P LK
Sbjct: 100 GINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLK 151
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWIRQAEWTTYTNHFQQLVEKRLHKHNXICVEDLIHEI 193
+ EP++ +G P+L S+RELV + + +VE++L IC+ED+IHEI
Sbjct: 143 VIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
Query: 192 FTVGEKFKYASNFLWPFKLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLXR 37
TVG F + FL F L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWIRQAEWTTYTNHFQQLVEKRLHKHNXICVEDLIHEI 193
+ EP++ +G P+L S+RELV + + +VE++L IC+ED+IHEI
Sbjct: 143 VIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
Query: 192 FTVGEKFKYASNFLWPFKLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLXR 37
TVG F + FL F L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWIRQAEWTTYTNHFQQLVEKRLHKHNXICVEDLIHEI 193
+ EP++ +G P+L S+RELV + + +VE++L IC+ED+IHEI
Sbjct: 143 VIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
Query: 192 FTVGEKFKYASNFLWPFKLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLXR 37
TVG F + FL F L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWIRQAEWTTYTNHFQQLVEKRLHKHNXICVEDLIHEI 193
+ EP++ +G P+L S+RELV + + +VE++L IC+ED+IHEI
Sbjct: 143 VIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
Query: 192 FTVGEKFKYASNFLWPFKLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLXR 37
TVG F + FL F L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 92.3 bits (219), Expect = 3e-19
Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = -3
Query: 372 IAEPYIAWGYPNLKSVRELVXXTWIRQAEWTTYTNHFQQLVEKRLHKHNXICVEDLIHEI 193
+ EP++ +G P+L S+RELV + + +VE++L IC+ED+IHEI
Sbjct: 143 VIEPFVVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEI 202
Query: 192 FTVGEKFKYASNFLWPFKLNNPTGGWRKK-TIHYVDGGDFGNREDKINDLLXR 37
TVG F + FL F L++P+ GW+KK ++ Y GG++G+R IN+L+ R
Sbjct: 203 CTVGPNFAAVNEFLCAFTLSSPSNGWQKKVSVSYKRGGEYGDRGTAINELIAR 255
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 380 HIHSSLIQTYKHTIVYLAQSKQLLNFTDLX*NLVDT 487
H+ L+Q +HT+V L Q++QL N DL +LVDT
Sbjct: 62 HVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDT 97
>AY119526-1|AAM50180.1| 447|Drosophila melanogaster GH16240p
protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 234 YGASSQQAVGSDWYTLSTQLGESTFXXLTHGHSLSWGIPKQC 359
YG+SSQQ +G Q +S F +G ++S G+P C
Sbjct: 377 YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGC 418
>AF097364-1|AAC71035.1| 530|Drosophila melanogaster Drongo protein.
Length = 530
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 234 YGASSQQAVGSDWYTLSTQLGESTFXXLTHGHSLSWGIPKQC 359
YG+SSQQ +G Q +S F +G ++S G+P C
Sbjct: 447 YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGC 488
>AE014134-166|AAN10487.1| 447|Drosophila melanogaster CG3365-PC,
isoform C protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 234 YGASSQQAVGSDWYTLSTQLGESTFXXLTHGHSLSWGIPKQC 359
YG+SSQQ +G Q +S F +G ++S G+P C
Sbjct: 377 YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGC 418
>AE014134-165|AAF51448.2| 532|Drosophila melanogaster CG3365-PA,
isoform A protein.
Length = 532
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 234 YGASSQQAVGSDWYTLSTQLGESTFXXLTHGHSLSWGIPKQC 359
YG+SSQQ +G Q +S F +G ++S G+P C
Sbjct: 377 YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGC 418
>AE014134-164|AAF51447.2| 602|Drosophila melanogaster CG3365-PB,
isoform B protein.
Length = 602
Score = 31.5 bits (68), Expect = 0.64
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 234 YGASSQQAVGSDWYTLSTQLGESTFXXLTHGHSLSWGIPKQC 359
YG+SSQQ +G Q +S F +G ++S G+P C
Sbjct: 447 YGSSSQQQMGHHLLQQQQQQQQSFFNFNNNGFAISQGLPNGC 488
>AY395750-1|AAR89513.1| 1199|Drosophila melanogaster ATM protein
protein.
Length = 1199
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 RRYRSIFTVALFRRTNTPLFIW 431
RRY+S+FT L PLFIW
Sbjct: 1105 RRYKSVFTTILEVLLYDPLFIW 1126
>AY113192-1|AAM29197.1| 574|Drosophila melanogaster AT01448p
protein.
Length = 574
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 RRYRSIFTVALFRRTNTPLFIW 431
RRY+S+FT L PLFIW
Sbjct: 480 RRYKSVFTTILEVLLYDPLFIW 501
>AE014297-1966|ABI31168.1| 2767|Drosophila melanogaster CG6535-PB
protein.
Length = 2767
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 366 RRYRSIFTVALFRRTNTPLFIW 431
RRY+S+FT L PLFIW
Sbjct: 2673 RRYKSVFTTILEVLLYDPLFIW 2694
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,519,077
Number of Sequences: 53049
Number of extensions: 439092
Number of successful extensions: 1090
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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