Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0615.Seq
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128048-1|BAC87250.1|  198|Homo sapiens protein ( Homo sapiens ...    30   4.8  
BC021197-1|AAH21197.2|  583|Homo sapiens C21orf29 protein protein.     29   6.4  

>AK128048-1|BAC87250.1|  198|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46168 fis, clone TESTI4003279. ).
          Length = 198

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 253 HRCCTSILRKFXGRQHCVTXDCCCHGS 333
           HR    +LR+  G QH     CCCH S
Sbjct: 49  HRGPLQVLRQPLGTQHPTQASCCCHTS 75


>BC021197-1|AAH21197.2|  583|Homo sapiens C21orf29 protein protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 265 CSSGVLPAAIPAELKPSTGATNGV 194
           CSS + P  I AE+ PS GAT+G+
Sbjct: 10  CSSDLRPLDILAEVVPSDGATSGI 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,262,725
Number of Sequences: 237096
Number of extensions: 946519
Number of successful extensions: 1907
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)