BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= msgV0614.Seq (309 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 44 1e-04 M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 44 1e-04 CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 44 1e-04 BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 44 1e-04 BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 44 1e-04 BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 44 1e-04 BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 44 1e-04 AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 44 1e-04 AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor ... 44 1e-04 AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 44 1e-04 BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. 36 0.032 AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens ... 36 0.032 AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 28 6.4 AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 28 6.4 >M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonucleoprotein autoantigen (Ro/SS-A), complete cds. ). Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor variant protein. Length = 406 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 34 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 62 >AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. Length = 417 Score = 43.6 bits (98), Expect = 1e-04 Identities = 17/29 (58%), Positives = 24/29 (82%) Frame = +3 Query: 168 EFGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 +FGKF L++GKF+ D + DKGL+T +DAR Sbjct: 45 DFGKFVLSSGKFYGDEEKDKGLQTSQDAR 73 >BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. Length = 384 Score = 35.5 bits (78), Expect = 0.032 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 171 FGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 FG F+L++GKF+ + DKGL+T ++ R Sbjct: 46 FGHFRLSSGKFYGHKEKDKGLQTTQNGR 73 Score = 28.3 bits (60), Expect = 4.8 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = +2 Query: 95 VFFEEKFPD-DSWESNWVYSXAPXKRIWKV*IDCWKVLQRPTG*QRFENL*RC*VYALSR 271 V+F+E+F D + W + W+ S R + K + + YA+S Sbjct: 21 VYFQEEFLDGEHWRNRWLQS-TNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISA 79 Query: 272 XFKPXSXEGKPL 307 FKP S +GK L Sbjct: 80 RFKPFSNKGKTL 91 >AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens cDNA FLJ25355 fis, clone TST01593. ). Length = 384 Score = 35.5 bits (78), Expect = 0.032 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +3 Query: 171 FGKFKLTAGKFFSDPQDDKGLKTXEDAR 254 FG F+L++GKF+ + DKGL+T ++ R Sbjct: 46 FGHFRLSSGKFYGHKEKDKGLQTTQNGR 73 Score = 28.3 bits (60), Expect = 4.8 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%) Frame = +2 Query: 95 VFFEEKFPD-DSWESNWVYSXAPXKRIWKV*IDCWKVLQRPTG*QRFENL*RC*VYALSR 271 V+F+E+F D + W + W+ S R + K + + YA+S Sbjct: 21 VYFQEEFLDGEHWRNRWLQS-TNDSRFGHFRLSSGKFYGHKEKDKGLQTTQNGRFYAISA 79 Query: 272 XFKPXSXEGKPL 307 FKP S +GK L Sbjct: 80 RFKPFSNKGKTL 91 >AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor marker CA125 protein. Length = 22152 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 45 LYWSLSACWHYLXXIXMYSLRRSFLMIRG 131 LYW LS H + + YSL R L + G Sbjct: 13413 LYWELSQLTHNITELGPYSLDRDSLYVNG 13441 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 45 LYWSLSACWHYLXXIXMYSLRRSFLMIRG 131 LYW LS H + + YSL R L + G Sbjct: 13569 LYWELSQLTHNITELGPYSLDRDSLYVNG 13597 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 45 LYWSLSACWHYLXXIXMYSLRRSFLMIRG 131 LYW LS H + + YSL R L + G Sbjct: 14349 LYWELSQLTHNITELGPYSLDRDSLYVNG 14377 >AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. Length = 6995 Score = 27.9 bits (59), Expect = 6.4 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +3 Query: 45 LYWSLSACWHYLXXIXMYSLRRSFLMIRG 131 LYW LS H + + YSL R L + G Sbjct: 4963 LYWELSQLTHNITELGPYSLDRDSLYVNG 4991 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 35,650,367 Number of Sequences: 237096 Number of extensions: 532921 Number of successful extensions: 784 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 675 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 784 length of database: 76,859,062 effective HSP length: 78 effective length of database: 58,365,574 effective search space used: 1400773776 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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