Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0613.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.26 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   7.4  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    22   9.8  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.26
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 101  KSPFGGGRPGRVKRKNLRKGQGGGAANDEEE 9
            KS  GGG   R +++  R+G GG + ++EEE
Sbjct: 947  KSQGGGG--SRKRKEKARRGSGGDSDSEEEE 975


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 14/61 (22%), Positives = 19/61 (31%)
 Frame = +2

Query: 17  HHWRLRHPVPCGGSSS*HVQDDLHRMEISERSQCACQSPGAQ*MMGCSQLACGHEYAFAG 196
           HH    H  P GG SS   +D       S            Q    C ++   H+    G
Sbjct: 161 HHHHHHHNAPAGGESSTSEKDSSRESSKSPMLMKMLTDKQEQTCQWCRKVIPSHQTGILG 220

Query: 197 S 199
           +
Sbjct: 221 T 221


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
          symporter protein.
          Length = 1127

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 44 GQGGGAANDEE 12
          G GGGAAND E
Sbjct: 10 GGGGGAANDVE 20


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 464,762
Number of Sequences: 2352
Number of extensions: 9617
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)