Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0613.Seq
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 156 4e-38
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 150 2e-36
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 149 7e-36
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 114 2e-25
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 46 9e-05
AK125508-1|BAC86186.1| 166|Homo sapiens protein ( Homo sapiens ... 31 2.1
AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK126845-1|BAC86719.1| 172|Homo sapiens protein ( Homo sapiens ... 29 6.5
AK123335-1|BAC85582.1| 172|Homo sapiens PTPRF), interacting pro... 29 6.5
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 156 bits (378), Expect = 4e-38
Identities = 74/84 (88%), Positives = 79/84 (94%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 91.1 bits (216), Expect = 2e-18
Identities = 43/53 (81%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 150 bits (364), Expect = 2e-36
Identities = 73/84 (86%), Positives = 77/84 (91%), Gaps = 1/84 (1%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP G GRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRP 170
Query: 74 GRVKRKNLRKGQGG-GAANDEEED 6
GRVKRKN +KGQGG GA +DEEED
Sbjct: 171 GRVKRKNAKKGQGGAGAGDDEEED 194
Score = 90.2 bits (214), Expect = 3e-18
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
EKDP+RLF+GNALLRRLVR+GVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 EKDPRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 69
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 149 bits (360), Expect = 7e-36
Identities = 69/83 (83%), Positives = 74/83 (89%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRP 75
QTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL SP+GGGRP
Sbjct: 111 QTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRP 170
Query: 74 GRVKRKNLRKGQGGGAANDEEED 6
GRVKRKN +KGQGG A D +E+
Sbjct: 171 GRVKRKNAKKGQGGAGAGDHKEE 193
Score = 83.4 bits (197), Expect = 4e-16
Identities = 40/53 (75%), Positives = 47/53 (88%)
Frame = -3
Query: 391 EKDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
+KDP+RLF+GNALL RLV IGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 65 QKDPRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 117
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 36 GLRNKREVWRVKFTLAKIRKAARELLTLDQKDPR 69
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 114 bits (274), Expect = 2e-25
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -2
Query: 254 QTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 81
QTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 50 QTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
Score = 87.4 bits (207), Expect = 2e-17
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -3
Query: 388 KDPKRLFKGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLRRRCSKL 233
+DP+RLF+GNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRL+ + KL
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKL 56
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 45.6 bits (103), Expect = 9e-05
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1
Query: 477 GLXNKRXVWRVKYTLAGIRKAAREXXXXXXXTPR 376
GL NKR VWRVK+TLA IRKAARE PR
Sbjct: 27 GLRNKREVWRVKFTLAKIRKAARELLTLDEKDPR 60
>AK125508-1|BAC86186.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ43520 fis, clone PLACE5000001. ).
Length = 166
Score = 31.1 bits (67), Expect = 2.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 324 WMKNR*NSIMCLV*RLRTSWSVVSDAGVQSW-PGEVHPSCQNFDPAKAYSCPQASCEHPI 148
W++NR + + L W+ +G QSW PG P +++PA + PQA E +
Sbjct: 68 WLRNRVRAGV-----LSRGWAREPGSGRQSWCPGGGGPGRLHWEPAPGWGVPQAYREQTL 122
Query: 147 IYCAPGLWQA 118
+ GL A
Sbjct: 123 LLRRGGLQPA 132
>AK128128-1|BAC87286.1| 222|Homo sapiens protein ( Homo sapiens
cDNA FLJ46249 fis, clone TESTI4021377. ).
Length = 222
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -1
Query: 183 YSCPQASCEHPIIYCAPGLWQAH*LLSEISIRWRSSWTCQ 64
+SCP A P+ + PG W +S W +W CQ
Sbjct: 139 WSCPYAGLTVPLPWLWPGPWPYSDPAMTLSWPWPGTWPCQ 178
>AK126845-1|BAC86719.1| 172|Homo sapiens protein ( Homo sapiens
cDNA FLJ44897 fis, clone BRAMY3002329. ).
Length = 172
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 270 SWSVVSDAGVQSWPGEVHPSCQNF 199
SW+ SD+GV +W G V C F
Sbjct: 15 SWTCPSDSGVAAWAGSVTLGCYTF 38
>AK123335-1|BAC85582.1| 172|Homo sapiens PTPRF), interacting
protein (liprin), alpha 1 protein.
Length = 172
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 270 SWSVVSDAGVQSWPGEVHPSCQNF 199
SW+ SD+GV +W G V C F
Sbjct: 15 SWTCPSDSGVAAWAGSVTLGCYTF 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,649,958
Number of Sequences: 237096
Number of extensions: 1531992
Number of successful extensions: 3352
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3343
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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