Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0611.Seq
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     28   0.20 
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   5.7  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   5.7  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   5.7  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.5  

>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 27.9 bits (59), Expect = 0.20
 Identities = 19/84 (22%), Positives = 35/84 (41%)
 Frame = +3

Query: 210 WRNDPDHRTRTN***ETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTE 389
           W   P HR  T+      E  S  +  + +   T+EA    QE +  +   + ++  TTE
Sbjct: 108 WLRPPFHRPTTST--AAPEGTSVASPTTAEASTTTEAATTTQEATTTEEATTTEEATTTE 165

Query: 390 LESPINQTETTEPQFSVSKQPSGE 461
             +   +  TTE   + ++  + E
Sbjct: 166 KATTTEEATTTEEATTTAEATTTE 189


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 180 LCCFFSVCWRFGLYCLCGFSKLFLVYW 100
           LC F+S   R GLY +   +KL  +Y+
Sbjct: 200 LCFFYSFVTRSGLYSVEDGAKLERLYY 226


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 180 LCCFFSVCWRFGLYCLCGFSKLFLVYW 100
           LC F+S   R GLY +   +KL  +Y+
Sbjct: 200 LCFFYSFVTRSGLYSVEDGAKLERLYY 226


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +1

Query: 34   REMAPETAQRSVKVVEVTKVQSPINQEQ 117
            R+M+ ET++R +  +     Q P+  +Q
Sbjct: 2966 RDMSTETSKRDIPNIPPAPEQQPVRHQQ 2993


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 202  EPFGETIPTIEPEPI 246
            +PF E +P +EPE +
Sbjct: 1517 QPFTELVPYVEPEQL 1531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,346
Number of Sequences: 2352
Number of extensions: 8162
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)