Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0610.Seq
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.5  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    23   2.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   3.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   3.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   3.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   6.0  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.9  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 416 KYPPLLDDIANGDGFH 369
           K PP L D A G GFH
Sbjct: 50  KSPPPLADAAVGKGFH 65


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 318 LRRRSAKLTHCY 283
           LR R+  LTHCY
Sbjct: 89  LRERTITLTHCY 100


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/39 (20%), Positives = 17/39 (43%)
 Frame = -3

Query: 133 WLRILD*QQCTSIMSINHGWSVACGSERVRATLCFYKNI 17
           W R +    C  +M  ++GW     + R+   L  + ++
Sbjct: 126 WPRFMKDWSCVEVMMASYGWPAGL-NRRLNVLLAVFMSL 163


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/39 (20%), Positives = 17/39 (43%)
 Frame = -3

Query: 133 WLRILD*QQCTSIMSINHGWSVACGSERVRATLCFYKNI 17
           W R +    C  +M  ++GW     + R+   L  + ++
Sbjct: 126 WPRFMKDWSCVEVMMASYGWPAGL-NRRLNVLLAVFMSL 163


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 8/39 (20%), Positives = 17/39 (43%)
 Frame = -3

Query: 133 WLRILD*QQCTSIMSINHGWSVACGSERVRATLCFYKNI 17
           W R +    C  +M  ++GW     + R+   L  + ++
Sbjct: 126 WPRFMKDWSCVEVMMASYGWPAGL-NRRLNVLLAVFMSL 163


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 9   RYLIFL*KHNVALTLSLPQATDQPW 83
           RY     +  VAL ++LP++  Q W
Sbjct: 92  RYPDIFMREEVALKINLPESRVQVW 116


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -2

Query: 125 DSGLTTMHIYYVNQPWLVSCL 63
           D+GL  + +    QPW   C+
Sbjct: 319 DAGLGNLSVCIDQQPWRSYCI 339


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,246
Number of Sequences: 336
Number of extensions: 2721
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)