Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0610.Seq
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-...    29   4.5  
AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-P...    29   4.5  
AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-P...    29   4.5  
AF038581-1|AAB97001.1|  372|Drosophila melanogaster QKR58E-2 pro...    28   7.9  

>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
           protein.
          Length = 16223

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = +3

Query: 174 NSCFRRLLKPFVSVRKFQEANKTGSDQSPDSTIGNHGNNVSALHSVFADIL 326
           +SC    +  F+S     + + TG DQ   + +GN   +V  L++ F+D++
Sbjct: 764 DSCTCNCMTDFISTSI--QISSTGPDQISQNKMGNQSQSVPLLNTEFSDLM 812


>AE014134-1672|AAF52796.1| 4345|Drosophila melanogaster CG15828-PA,
            isoform A protein.
          Length = 4345

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 430  WYPSRNIHRCLMILLTETDFTKQACVPWMGRHY 332
            +YP RN+       +T+T+F       W+G +Y
Sbjct: 3012 FYPKRNLSSSGQYYMTDTNFNSDLSFQWLGGNY 3044


>AE014134-1671|AAS64667.1| 4374|Drosophila melanogaster CG15828-PB,
            isoform B protein.
          Length = 4374

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -3

Query: 430  WYPSRNIHRCLMILLTETDFTKQACVPWMGRHY 332
            +YP RN+       +T+T+F       W+G +Y
Sbjct: 3041 FYPKRNLSSSGQYYMTDTNFNSDLSFQWLGGNY 3073


>AF038581-1|AAB97001.1|  372|Drosophila melanogaster QKR58E-2
           protein.
          Length = 372

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/46 (23%), Positives = 25/46 (54%)
 Frame = +1

Query: 229 KLIKPVAINPRIQQSETMVTMCQLCTPSSQTSCSNNDAPSKEHRLA 366
           K+   + ++P  Q+ + + ++ Q C P ++T C++ +     H LA
Sbjct: 302 KVSATITLSP--QRGDCLFSLTQQCVPPAKTLCASRNGQCHAHHLA 345


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,089,283
Number of Sequences: 53049
Number of extensions: 528630
Number of successful extensions: 1167
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)