Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0603.Seq
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0546 - 9381989-9383733,9385838-9386054 124 5e-29
05_05_0109 - 22454539-22456268,22457069-22457279 121 4e-28
03_02_0540 + 9340379-9340592,9341250-9342988 119 1e-27
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 118 3e-27
03_06_0484 + 34233042-34233258,34235317-34237049 117 6e-27
11_08_0075 + 28173220-28173433,28175348-28177083 115 2e-26
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 113 7e-26
02_01_0112 - 839048-839552,839638-839720,839828-839982,840078-84... 113 7e-26
08_01_0654 - 5639419-5641449 109 1e-24
05_04_0392 - 20889699-20891726 107 4e-24
03_02_0542 - 9348126-9349585,9352433-9352655 103 8e-23
05_04_0052 - 17515344-17517353 101 3e-22
11_01_0564 - 4447078-4448519,4449465-4449711 97 7e-21
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 93 1e-19
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819 90 1e-18
01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165 76 2e-14
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 70 9e-13
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 67 8e-12
12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231 64 6e-11
12_02_0825 + 23476943-23476952,23477263-23477328,23477737-234778... 61 5e-10
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 49 2e-06
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 47 7e-06
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 46 1e-05
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 46 2e-05
03_02_0180 - 6211823-6213559 35 0.041
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 34 0.071
12_01_0346 + 2652181-2653566 33 0.12
04_04_1042 - 30346132-30346285,30346629-30346759,30346867-303469... 29 2.0
06_01_0770 - 5756200-5756741,5756790-5757286,5757356-5757782,575... 29 2.7
10_01_0121 - 1493822-1494316 28 3.5
08_02_1477 - 27375872-27376723,27376825-27377091 28 3.5
08_02_1261 + 25689487-25689666,25690642-25690887,25691032-256911... 28 3.5
03_01_0126 + 982163-982527,983006-983204,984141-984222,984284-98... 28 4.7
11_06_0686 + 26280772-26281611 27 6.2
03_04_0025 - 16557328-16557851,16558000-16558123,16558518-165586... 27 6.2
02_05_1138 + 34379697-34380902 27 6.2
04_03_0694 + 18781776-18781994,18782475-18782648,18782743-187830... 27 8.2
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 124 bits (298), Expect = 5e-29
Identities = 77/145 (53%), Positives = 89/145 (61%), Gaps = 11/145 (7%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+ PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 66
Query: 252 PTT-----------QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKT 398
PT ++S P+V D+ KM K + V+ +
Sbjct: 67 PTNTVFDAKRLIGRRFSDPSVQADM--KMWPFKVVPGPADKPMIVVT--------YKGEE 116
Query: 399 KPFSPRKSXSMVLTKMNETAEXILA 473
K FS + SMVLTKM E AE L+
Sbjct: 117 KKFSAEEISSMVLTKMKEIAEAFLS 141
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F D +VQADMK WPF+VV K I Y GE+K F EE+
Sbjct: 67 PTNTVFDAKRLIGRRFSDPSVQADMKMWPFKVVPGPADKPMIVVTYKGEEKKFSAEEISS 126
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + +L T++NAV
Sbjct: 127 MVLTKMKEIAEAFLSTTIKNAV 148
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 121 bits (291), Expect = 4e-28
Identities = 75/144 (52%), Positives = 88/144 (61%), Gaps = 11/144 (7%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+ PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN
Sbjct: 5 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 64
Query: 252 PTT-----------QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKT 398
PT ++S P+V D+ K+ K G + V+ +
Sbjct: 65 PTNTVFDAKRLIGRRFSDPSVQSDM--KLWPFKVVPGPGDKPMIVV--------QYKGEE 114
Query: 399 KPFSPRKSXSMVLTKMNETAEXIL 470
K F+ + SMVL KM E AE L
Sbjct: 115 KQFAAEEISSMVLIKMREIAEAYL 138
Score = 76.2 bits (179), Expect = 1e-14
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F D +VQ+DMK WPF+VV G K I Y GE+K F EE+
Sbjct: 65 PTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVPGPGDKPMIVVQYKGEEKQFAAEEISS 124
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG +++NAV
Sbjct: 125 MVLIKMREIAEAYLGSSIKNAV 146
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 119 bits (287), Expect = 1e-27
Identities = 70/132 (53%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP- 254
PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 8 PAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPI 67
Query: 255 TTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKSXSMV 434
T + + S + L + K FS + SMV
Sbjct: 68 NTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSAEEISSMV 127
Query: 435 LTKMNETAEXIL 470
L KM ETAE L
Sbjct: 128 LNKMKETAEAYL 139
Score = 75.8 bits (178), Expect = 2e-14
Identities = 39/82 (47%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F D +VQ+D K WPF+V+ G K I Y GE+K F EE+
Sbjct: 66 PINTVFDAKRLIGRRFSDTSVQSDAKLWPFKVLPGPGDKPMIGVQYKGEEKQFSAEEISS 125
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + YLG TV+NAV
Sbjct: 126 MVLNKMKETAEAYLGSTVKNAV 147
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 118 bits (284), Expect = 3e-27
Identities = 77/149 (51%), Positives = 90/149 (60%), Gaps = 13/149 (8%)
Frame = +3
Query: 63 KMAKA--PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 236
+MAK PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKN
Sbjct: 193 EMAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN 252
Query: 237 QVAMNPTT-----------QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXH 383
QVAMNP ++S P+V D+ K+ K G + V+
Sbjct: 253 QVAMNPINTVFDAKRLIGRRFSDPSVQSDM--KLWPFKVIPGPGDKPMIVV--------Q 302
Query: 384 IXVKTKPFSPRKSXSMVLTKMNETAEXIL 470
+ K FS + SMVL KM E AE L
Sbjct: 303 YKGEEKQFSAEEISSMVLIKMREIAEAYL 331
Score = 74.9 bits (176), Expect = 3e-14
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F D +VQ+DMK WPF+V+ G K I Y GE+K F EE+
Sbjct: 258 PINTVFDAKRLIGRRFSDPSVQSDMKLWPFKVIPGPGDKPMIVVQYKGEEKQFSAEEISS 317
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG ++NAV
Sbjct: 318 MVLIKMREIAEAYLGSNIKNAV 339
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 117 bits (281), Expect = 6e-27
Identities = 53/61 (86%), Positives = 56/61 (91%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+ PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYV FTDTERLIGDAAKNQVAMN
Sbjct: 7 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDTERLIGDAAKNQVAMN 66
Query: 252 P 254
P
Sbjct: 67 P 67
Score = 77.0 bits (181), Expect = 8e-15
Identities = 39/82 (47%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F DA+VQ+D+K WP++V+ G K I Y GE+K F EE+
Sbjct: 67 PINTVFDAKRLIGRRFSDASVQSDIKMWPYKVIPGPGDKPMIVVQYKGEEKQFSAEEISS 126
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG TV+NAV
Sbjct: 127 MVLIKMREIAEAYLGSTVKNAV 148
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 115 bits (277), Expect = 2e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+ PA+GIDLGTTYSCVGV H +VEIIANDQGNRTTPSYV FTD+ERLIGDAAKNQVAMN
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKNQVAMN 65
Query: 252 P 254
P
Sbjct: 66 P 66
Score = 77.4 bits (182), Expect = 6e-15
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+FDAKRL GR+F DA+VQ+D+K WPF+V++ G K I Y GE+K F EE+
Sbjct: 66 PINTVFDAKRLIGRRFSDASVQSDIKLWPFKVIAGPGDKPMIVVQYKGEEKQFAAEEISS 125
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG T++NAV
Sbjct: 126 MVLIKMREIAEAYLGTTIKNAV 147
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 113 bits (272), Expect = 7e-26
Identities = 62/141 (43%), Positives = 85/141 (60%), Gaps = 3/141 (2%)
Frame = +3
Query: 63 KMAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 242
+ K P +GIDLGTTYSCVGV +G V+I+ANDQGNR TPS+VAFTD ERL+G+AAKNQ
Sbjct: 33 RKTKGPVIGIDLGTTYSCVGVYRNGHVDIVANDQGNRITPSWVAFTDDERLVGEAAKNQA 92
Query: 243 AMNPTTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK---TKPFSP 413
A+NP ++ ++ + + + V+D + + VK K FSP
Sbjct: 93 ALNP--DRTIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVKAGEVKVFSP 150
Query: 414 RKSXSMVLTKMNETAEXILAK 476
+ +M+L KM ETAE L +
Sbjct: 151 EEISAMILAKMKETAESYLGQ 171
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXY-XGEDKTFFPEEVXF 427
P TIFD KRL GR+F+D VQ D+K+ P++VV G K ++ GE K F PEE+
Sbjct: 96 PDRTIFDIKRLIGRRFDDEEVQRDVKYLPYKVVDKGGKPYVEVRVKAGEVKVFSPEEISA 155
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + YLG+ V +AV
Sbjct: 156 MILAKMKETAESYLGQRVTDAV 177
>02_01_0112 -
839048-839552,839638-839720,839828-839982,840078-840557,
840855-841097,841189-841403,841489-841756,842477-842525
Length = 665
Score = 113 bits (272), Expect = 7e-26
Identities = 64/134 (47%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQ 263
+GIDLGTTYSCVGV +G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP +
Sbjct: 36 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNP--E 93
Query: 264 YSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK---TKPFSPRKSXSMV 434
++ +V + K + L +++ + + +K K FSP + +M+
Sbjct: 94 RTIFDVKRLIGRKFEDKEVQRDMKLVPYKIVNKDGKPYIQVKIKDGENKVFSPEEVSAMI 153
Query: 435 LTKMNETAEXILAK 476
L KM ETAE L K
Sbjct: 154 LGKMKETAEAYLGK 167
>08_01_0654 - 5639419-5641449
Length = 676
Score = 109 bits (262), Expect = 1e-24
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTT 260
+GIDLGTTYSCVGV +G VEIIANDQGNR TPS+VAFTD ERLIG+AAKNQ A NP
Sbjct: 47 IGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANP-- 104
Query: 261 QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK---TKPFSPRKSXSM 431
+ ++ + + + + L +V+D + + VK + FSP + +M
Sbjct: 105 ERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAM 164
Query: 432 VLTKMNETAEXILAK 476
VLT+M ETAE L +
Sbjct: 165 VLTRMKETAEAYLGE 179
>05_04_0392 - 20889699-20891726
Length = 675
Score = 107 bits (258), Expect = 4e-24
Identities = 63/135 (46%), Positives = 84/135 (62%), Gaps = 4/135 (2%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTD-TERLIGDAAKNQVAMNPTT 260
+GIDLGTTYSCVGV + +VEIIANDQGNR TPS+VAFTD ERLIG+AAKNQ A NP
Sbjct: 47 IGIDLGTTYSCVGVYRNDRVEIIANDQGNRITPSWVAFTDGGERLIGEAAKNQAAANP-- 104
Query: 261 QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK---TKPFSPRKSXSM 431
+ ++ + + + + L +V+D + + VK + FSP + +M
Sbjct: 105 ERTIYDAKRLIGRQFSDAEVQRDMKLLPFAVVDRNGKPHVRVEVKDGDVRVFSPEEVSAM 164
Query: 432 VLTKMNETAEXILAK 476
VLT+M ETAE L +
Sbjct: 165 VLTRMKETAEAYLGE 179
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 103 bits (247), Expect = 8e-23
Identities = 65/134 (48%), Positives = 74/134 (55%), Gaps = 1/134 (0%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP- 254
PAVGIDLGTTYSCV V G+VE+I NDQGN TTPS VAFTDT RLIGDAA NQ AMNP
Sbjct: 11 PAVGIDLGTTYSCVAVWRRGRVEVIPNDQGNLTTPSCVAFTDTWRLIGDAALNQAAMNPL 70
Query: 255 TTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKSXSMV 434
T + + S + + S D + K FS + +MV
Sbjct: 71 NTIFDAKRLIGRRFSDVSVQGDIKLWPFKVTSGKDDRPMIVVQYRGEEKEFSAEEISAMV 130
Query: 435 LTKMNETAEXILAK 476
L KM ETAE L K
Sbjct: 131 LFKMKETAEAYLDK 144
Score = 72.9 bits (171), Expect = 1e-13
Identities = 38/82 (46%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
P NTIFDAKRL GR+F D +VQ D+K WPF+V S + I Y GE+K F EE+
Sbjct: 69 PLNTIFDAKRLIGRRFSDVSVQGDIKLWPFKVTSGKDDRPMIVVQYRGEEKEFSAEEISA 128
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
++ + YL KTV+ AV
Sbjct: 129 MVLFKMKETAEAYLDKTVEKAV 150
>05_04_0052 - 17515344-17517353
Length = 669
Score = 101 bits (242), Expect = 3e-22
Identities = 62/136 (45%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNP-T 257
+GIDLGTTYSCVGV +G VEIIANDQGNR TPS+VAFT ERLIG+AAKNQ A NP
Sbjct: 42 IGIDLGTTYSCVGVYRNGHVEIIANDQGNRITPSWVAFTGGGERLIGEAAKNQAAANPGR 101
Query: 258 TQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK---TKPFSPRKSXS 428
T Y + + + + L +V+D + + V+ + SP + +
Sbjct: 102 TVYDAKRL---IGRRFADAEVQRDMRLLPFAVVDKGGKPHVRVEVRGGDVRLLSPEEVSA 158
Query: 429 MVLTKMNETAEXILAK 476
MVL +M ETAE L +
Sbjct: 159 MVLARMKETAEAYLGE 174
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 97.1 bits (231), Expect = 7e-21
Identities = 64/139 (46%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMN 251
PAVGIDLGTTYSCV V H + E+IANDQGNR TPS VAFT D + +GDAA NQ A+N
Sbjct: 17 PAVGIDLGTTYSCVAVWRHDRGEVIANDQGNRLTPSCVAFTADDDDSFVGDAAFNQSALN 76
Query: 252 PTTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK----TKPFSPRK 419
PT ++ V + + L V+ A R I V+ + F P +
Sbjct: 77 PTN--TIFEVKRLIGRRFSDDSVQKDIKLWPFKVV-AGQEDRPMIVVRHEGEERQFMPEE 133
Query: 420 SXSMVLTKMNETAEXILAK 476
SMVL KM ETAE L K
Sbjct: 134 ISSMVLAKMRETAEVYLGK 152
Score = 71.7 bits (168), Expect = 3e-13
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
P NTIF+ KRL GR+F D +VQ D+K WPF+VV+ + I + GE++ F PEE+
Sbjct: 77 PTNTIFEVKRLIGRRFSDDSVQKDIKLWPFKVVAGQEDRPMIVVRHEGEERQFMPEEISS 136
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLGKTV NAV
Sbjct: 137 MVLAKMRETAEVYLGKTVTNAV 158
>11_01_0563 +
4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 93.1 bits (221), Expect = 1e-19
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 257
PA+GIDLGTTYSC V H + E+I NDQGNR TPS VAFT +R +GDAA+NQ A+NPT
Sbjct: 642 PAIGIDLGTTYSCAAVRRHNRSEVITNDQGNRITPSCVAFTADDRFVGDAAENQAALNPT 701
Score = 89.0 bits (211), Expect = 2e-18
Identities = 40/60 (66%), Positives = 46/60 (76%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 257
PA+GIDLGTTYSCV V + E I NDQGNR TPS VAFT +R +GDAA+NQ A+NPT
Sbjct: 16 PAIGIDLGTTYSCVAVRRRYRSEAITNDQGNRITPSCVAFTAADRFVGDAAENQAALNPT 75
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSD-GCKXKIKXXYXGEDKTFFPEEVXF 427
P NTIF+ KRL GR+F D +VQ D+K WPF+V++ + I + G++K F PEE+
Sbjct: 74 PTNTIFEVKRLIGRRFSDKSVQEDIKLWPFKVIAGRDDRPTIVVRHEGKEKQFVPEEISA 133
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG+ V +AV
Sbjct: 134 MVLSKLRDAAVAYLGEPVTDAV 155
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
P NTIF+AKRL GR+F +VQ D+K WPF+VV+ + I + G++ F PEE+
Sbjct: 700 PTNTIFEAKRLIGRRFSSKSVQEDIKLWPFKVVAGPDDRPTIVVQHEGKEMQFVPEEISA 759
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ YLG+ V +AV
Sbjct: 760 MVLSKLRDAAVAYLGEPVTDAV 781
>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
Length = 539
Score = 89.8 bits (213), Expect = 1e-18
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +3
Query: 78 PAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPT 257
P +GIDLGT SCV V +G+ EI+ N+ G R TPSY AFTDTERL+GDAAK+Q + NPT
Sbjct: 10 PVIGIDLGTACSCVAVWQNGRAEIVTNEHGGRATPSYAAFTDTERLVGDAAKSQASRNPT 69
Score = 62.1 bits (144), Expect = 2e-10
Identities = 34/82 (41%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVV-SDGCKXKIKXXYXGEDKTFFPEEVXF 427
P NT+F KRL GR+F DA+VQ +K WPF+VV G K + Y G+ K EEV
Sbjct: 68 PTNTVFATKRLMGRRFSDASVQDGLKLWPFKVVPGRGDKPMVAASYKGKQKLLAAEEVAS 127
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + Y+G V+NAV
Sbjct: 128 MLLSKMKAEAEAYIGGPVKNAV 149
>01_05_0122 + 18366119-18367014,18367042-18367397,18367471-18368165
Length = 648
Score = 75.8 bits (178), Expect = 2e-14
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTD--TERLIGDAAKNQVAMNPT 257
+GID+G TYSCV V G+VEII NDQG+R TPS+VAFTD ++G+AAK Q +P
Sbjct: 37 LGIDIGATYSCVAVYCKGRVEIIPNDQGSRLTPSWVAFTDGGGRLVVGEAAKEQAVGSPG 96
Query: 258 TQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK-----TKPFSPRKS 422
++ + + K L ++RL + + H+ V+ + SP +
Sbjct: 97 R--AVHDFMRLLGKK--LGDDDVQREMTRLPYAVVDMEGKPHVLVEAADGDVRVLSPEEI 152
Query: 423 XSMVLTKMNETAEXILAK 476
+ VL KM +TAE L +
Sbjct: 153 AAAVLAKMKKTAEAHLGR 170
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 70.1 bits (164), Expect = 9e-13
Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTT 260
+GIDLGTT SCV V ++I N +G RTTPS VAF ERL+G AK Q NP
Sbjct: 55 IGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVGTPAKRQAVTNP-- 112
Query: 261 QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKSXSMVLT 440
Q + + + + + ++ A K +SP + + VLT
Sbjct: 113 QNTFFGTKRLIGRRFEDPQTQKEMKMVPYKIVKAPNGDAWVETTDGKQYSPSQIGAFVLT 172
Query: 441 KMNETAEXILAK 476
KM ETAE L K
Sbjct: 173 KMKETAESYLGK 184
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/81 (33%), Positives = 38/81 (46%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NT F KRL GR+FED Q +MK P+++V + K + P ++
Sbjct: 112 PQNTFFGTKRLIGRRFEDPQTQKEMKMVPYKIVK--APNGDAWVETTDGKQYSPSQIGAF 169
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLGKTV AV
Sbjct: 170 VLTKMKETAESYLGKTVSKAV 190
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 66.9 bits (156), Expect = 8e-12
Identities = 46/132 (34%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTT 260
+GIDLGTT SCV V ++I N +G RTTPS VAF E L+G AK Q NP
Sbjct: 35 IGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGELLVGTPAKRQAVTNP-- 92
Query: 261 QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKSXSMVLT 440
Q + + + + + ++ A K +SP + + VLT
Sbjct: 93 QNTFFGTKRLIGRRFDDPQTQKEMKMVPYKIVKALNGDAWLETTDGKQYSPSQIGAFVLT 152
Query: 441 KMNETAEXILAK 476
KM ETAE L K
Sbjct: 153 KMKETAESYLGK 164
Score = 44.0 bits (99), Expect = 7e-05
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NT F KRL GR+F+D Q +MK P+++V + K + P ++
Sbjct: 92 PQNTFFGTKRLIGRRFDDPQTQKEMKMVPYKIVK--ALNGDAWLETTDGKQYSPSQIGAF 149
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLGK+V AV
Sbjct: 150 VLTKMKETAESYLGKSVSKAV 170
>12_01_0850 + 7985289-7985789,7986636-7986888,7987173-7987231
Length = 270
Score = 64.1 bits (149), Expect = 6e-11
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 63 KMAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQ 239
++A VGIDLGTT S V GK +I N +G RTTPS VA+T ERL+G AK Q
Sbjct: 47 RVACEKVVGIDLGTTNSAVAAMEGGKPTVITNAEGQRTTPSVVAYTKGGERLVGQIAKRQ 106
Query: 240 VAMNPTTQY 266
+NP +
Sbjct: 107 AVVNPENTF 115
Score = 30.3 bits (65), Expect = 0.88
Identities = 20/57 (35%), Positives = 24/57 (42%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEV 421
P NT F KR GRK A V + K + VV D +K K F EE+
Sbjct: 111 PENTFFSVKRFIGRKM--AEVDDEAKQVSYHVVRDD-NGNVKLDCPAIGKQFAAEEI 164
>12_02_0825 +
23476943-23476952,23477263-23477328,23477737-23477885,
23478148-23478212,23479247-23479710,23479724-23480208
Length = 412
Score = 60.9 bits (141), Expect = 5e-10
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 269 DAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXFHGAYEN 445
DAKRL G++F DA+VQ+D+ WPF+V++ G K I Y GE+K F EE+ +
Sbjct: 102 DAKRLIGQRFTDASVQSDIMLWPFKVIAGPGDKSMIVVQYKGEEKQFAAEEISSMVLIKM 161
Query: 446 E*NCRXYLGKTVQNAV 493
YLG T++ AV
Sbjct: 162 REIAEAYLGTTIKKAV 177
Score = 53.6 bits (123), Expect = 8e-08
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEV 421
N +AKRL GR+F DA+VQ+D+K WPF+V++ G K I Y GE+K E++
Sbjct: 22 NMAENAKRLIGRRFTDASVQSDIKLWPFKVIAGPGDKSTIVVQYKGEEKQVAAEQI 77
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 269 DAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEV 421
+AKRL GR+F D +VQ D+K WPF+V++ + I + G++ F PEEV
Sbjct: 16 EAKRLIGRRFSDKSVQEDIKLWPFKVIAGPDDRPTIVVQHEGKEMQFVPEEV 67
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQ 263
VG DLG V V ++++ N++ R TP+ V F D +R IG A MNP
Sbjct: 4 VGFDLGNESCIVAVARQRGIDVVLNEESKRETPAIVCFGDKQRFIGTAGAASSTMNPKNS 63
Query: 264 YS 269
S
Sbjct: 64 VS 65
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS--DGCKXKIKXXYXGEDKTFFPEEV 421
P N++ KRL GRK+ D +Q D+ +PF V DG + Y GE++ F P ++
Sbjct: 60 PKNSVSQIKRLLGRKYSDPELQRDIAAFPFRVSEGPDGFPL-VHARYLGEERVFTPTQL 117
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/62 (33%), Positives = 30/62 (48%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQ 263
VG D+G V V ++++ N++ R TP+ V F D +R IG A MNP
Sbjct: 4 VGFDVGNESGIVAVARQRGIDVVLNEESKRETPAVVCFGDKQRFIGTAGAASSTMNPRNS 63
Query: 264 YS 269
S
Sbjct: 64 VS 65
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS--DGCKXKIKXXYXGEDKTFFPEEV 421
P N++ KRL GR F D +Q D+ +PF V DG + Y GED+ F P ++
Sbjct: 60 PRNSVSQIKRLLGRAFADPELQRDLASFPFRVSEGPDGFPL-VHARYLGEDRAFTPTQL 117
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = +3
Query: 135 GKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTTQY 266
GK I+ N +G RTTPS VA+T + +RL+G AK Q +NP +
Sbjct: 4 GKPTIVTNAEGARTTPSVVAYTKSGDRLVGQIAKRQAVVNPENTF 48
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEV 421
P NT F KR GRK + V + K + V+ D +K K F EE+
Sbjct: 44 PENTFFSVKRFIGRKMNE--VDEESKQVSYRVIRDD-NGNVKLDCPAIGKQFAAEEI 97
>03_02_0180 - 6211823-6213559
Length = 578
Score = 34.7 bits (76), Expect = 0.041
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTD 203
A+GID+GT+ V V +VE++ N + + SYV F D
Sbjct: 28 AIGIDIGTSNCSVAVWTGHQVELLKNTRNQKGMRSYVMFKD 68
Score = 27.9 bits (59), Expect = 4.7
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPF--EVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
+ IF+ KRL GR D VQA K PF + + G + I ++ PEEV
Sbjct: 94 SAIFNMKRLIGRMDTDEVVQAS-KSLPFLVQTLGIGVRPFIAALVNNMWRSTTPEEVLAI 152
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
E + +L V+NAV
Sbjct: 153 FLLELKALVEMHLKHPVRNAV 173
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 33.9 bits (74), Expect = 0.071
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAA 230
VG D+G ++++ N + NR +P+ VAF+ RL+G A
Sbjct: 4 VGFDVGNDTLVAAAARQRGIDVLLNAESNRESPAAVAFSHNARLLGPHA 52
>12_01_0346 + 2652181-2653566
Length = 461
Score = 33.1 bits (72), Expect = 0.12
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVA 245
+ +DLG T SCV +G E A P+ VAFT D + L+G+AAKN A
Sbjct: 47 IAVDLGNTNSCVA--GYGD-EADAPPLFRLCIPTSVAFTGDGDALVGEAAKNHPA 98
>04_04_1042 -
30346132-30346285,30346629-30346759,30346867-30346938,
30347284-30347370,30347479-30347505,30347777-30347869,
30348470-30348558,30348649-30348727,30349102-30349231,
30349344-30349464,30349619-30349726,30349837-30350152
Length = 468
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -2
Query: 126 RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKR 13
+H R W+ D F L +LL F + CYL L+ R
Sbjct: 71 KHARFLNWHLDLFCLILLLVFVLPYYHCYLLLRNSGVR 108
>06_01_0770 -
5756200-5756741,5756790-5757286,5757356-5757782,
5757854-5757911
Length = 507
Score = 28.7 bits (61), Expect = 2.7
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVXXHGKVEIIANDQGNR-TTPSYVAFT-DTERLI-GDAAKNQVAMN 251
A I LG T SC+ + A + PS+VA D +I G+AA N+ A++
Sbjct: 70 AAAIHLGNTNSCIAGYDDDDAPLGAKRSYYQFCIPSWVALAHDNGTVISGEAAMNRAALS 129
Query: 252 PTTQYS 269
P+T S
Sbjct: 130 PSTAVS 135
>10_01_0121 - 1493822-1494316
Length = 164
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 62 QNGKSTRSRNRSGYHVLLRWCLXXREGGDHRQRPG 166
+ G+ R G L RWC R+GG R R G
Sbjct: 36 RRGRQIRPLEGHGRQRLWRWCSGGRQGGMQRGRSG 70
>08_02_1477 - 27375872-27376723,27376825-27377091
Length = 372
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 218 RRCRQEPGGDEPHNTIFDAKRLXGRKFEDATVQADMKHWP 337
+R R + GGD+ H A+ + GR A+ + WP
Sbjct: 301 KRMRHDGGGDDDHAATVKAEPMDGRPHGKDEQSAETQAWP 340
>08_02_1261 +
25689487-25689666,25690642-25690887,25691032-25691128,
25691233-25691630,25692013-25692267
Length = 391
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 94 IWVPRTLALVSXXTGRWRSSPTTRATGPLRLMLRS 198
+W+P+ +L G W SP ++ P +++ S
Sbjct: 357 VWIPKHFSLSQDKNGSWECSPLEKSVPPAPIIVPS 391
>03_01_0126 +
982163-982527,983006-983204,984141-984222,984284-984360,
984548-984622,984725-984790,985220-985315,985424-985540,
985777-985869,986052-986153,986239-986325,986401-986433
Length = 463
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 139 RWRSSPTTRATGPLRLMLRSQTPSVXSEMPP 231
RWR +P T T PL+L L + P V P
Sbjct: 151 RWREAPVTVETRPLQLPLARRGPRVLDPNVP 181
>11_06_0686 + 26280772-26281611
Length = 279
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = +2
Query: 98 GYHVLLRWCLXXREGGDHRQRPGQQDHSVLCCVHRHRASXRRCR 229
GY++ C GG H+QR G H H H S C+
Sbjct: 212 GYYLYYWQCTDGLAGGYHQQRGGHYCHCAAGDGHGHYYSPSSCQ 255
>03_04_0025 -
16557328-16557851,16558000-16558123,16558518-16558654,
16561050-16561185,16561296-16561721
Length = 448
Score = 27.5 bits (58), Expect = 6.2
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 77 TRSRNRSGYHVLLRWCL-XXREGGDHRQRPGQQDHSVLCCVHRHRAS 214
TR + RSG+ L R CL G + RPG + + H AS
Sbjct: 2 TRKKERSGWGSLFRGCLSGGGAAGSRKVRPGPRTAAAAAAKHGGGAS 48
>02_05_1138 + 34379697-34380902
Length = 401
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 93 DLGTT-YSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTE 209
D+ T Y CVGV HG+ ++ + ++ S A D E
Sbjct: 178 DMSTRRYKCVGVTWHGRFHVVGGFAESTSSSSPAAAADDE 217
>04_03_0694 +
18781776-18781994,18782475-18782648,18782743-18783057,
18783791-18785569,18786334-18786651,18787052-18787105
Length = 952
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 281 DVWHRILCCGVHRHLVLGGISDXTLGVCERNIRRS 177
++ R+ CC R V G D T+G+ +R R S
Sbjct: 22 EIASRVSCCSGGRGRVAVGCDDGTVGLLDRGFRLS 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,393,326
Number of Sequences: 37544
Number of extensions: 265132
Number of successful extensions: 754
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1023611560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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