Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0603.Seq
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   7.5  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.5  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.5  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -3

Query: 182 RSGPVALVVGDDLHLPVXXDTNARVRGTQIDSYCGCFCH 66
           RS PVA  V  ++      D ++ V G+ +    G F H
Sbjct: 81  RSKPVAFAVRTNVSYDGSLDDDSPVHGSAVSFEVGDFLH 119


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 264 IVLWGSSPPGSWRHLR 217
           IV+WG  PPG   + R
Sbjct: 329 IVVWGKRPPGEAENSR 344


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 115  QEYVVPRSIPTAGAFA 68
            Q+Y  PR++ +AG FA
Sbjct: 1244 QDYAPPRALMSAGGFA 1259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,063
Number of Sequences: 2352
Number of extensions: 10390
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)