Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0603.Seq
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 133 8e-32
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 131 2e-31
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 114 3e-26
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 114 3e-26
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 108 2e-24
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 102 1e-22
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 102 2e-22
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 102 2e-22
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 63 9e-11
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 62 3e-10
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 56 1e-08
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 45 3e-05
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 36 0.016
AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical... 29 2.4
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 4.2
AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical ... 27 5.6
Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical pr... 27 7.4
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 27 7.4
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 27 9.8
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 27 9.8
AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical ... 27 9.8
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 27 9.8
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 133 bits (321), Expect = 8e-32
Identities = 75/136 (55%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGV HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNP-TTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKS 422
MNP T + + + +S A + + + K F+P +
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 423 XSMVLTKMNETAEXIL 470
SMVL KM ETAE L
Sbjct: 121 SSMVLLKMKETAEAFL 136
Score = 95.5 bits (227), Expect = 2e-20
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
PHNT+FDAKRL GRKF+D VQ+DMKHWPF+V+S +G K K++ Y GE+K F PEE+
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + +LG TV++AV
Sbjct: 123 MVLLKMKETAEAFLGTTVKDAV 144
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 131 bits (317), Expect = 2e-31
Identities = 74/136 (54%), Positives = 85/136 (62%), Gaps = 1/136 (0%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+K AVGIDLGTTYSCVGV HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1 MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60
Query: 246 MNP-TTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTKPFSPRKS 422
MNP T + + + +S A + + + K F+P +
Sbjct: 61 MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120
Query: 423 XSMVLTKMNETAEXIL 470
SMVL KM +TAE L
Sbjct: 121 SSMVLLKMKKTAEAFL 136
Score = 92.3 bits (219), Expect = 2e-19
Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEVXF 427
PHNT+FDAKRL GRKF+D VQ+DMKHWPF+V+S +G K K++ Y GE+K F PEE+
Sbjct: 63 PHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISS 122
Query: 428 HGAYENE*NCRXYLGKTVQNAV 493
+ + +L TV++AV
Sbjct: 123 MVLLKMKKTAEAFLEPTVKDAV 144
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 114 bits (275), Expect = 3e-26
Identities = 66/141 (46%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG+ +GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNP-TTQYSMPNV---SXDVSSKMLLCK--PT*STGLSRLSVMDAXLRSRXHIXVKTKPF 407
NP T + + D S+ CK P G V++ ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 408 SPRKSXSMVLTKMNETAEXIL 470
+P + +MVL KM ETAE L
Sbjct: 115 NPEEISAMVLQKMKETAETYL 135
Score = 77.4 bits (182), Expect = 5e-15
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NT+FDAKRL GR+F+++TVQ+D KHWPF V K I+ GE + F PEE+
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLG TV++AV
Sbjct: 123 VLQKMKETAETYLGHTVKDAV 143
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 114 bits (275), Expect = 3e-26
Identities = 66/141 (46%), Positives = 87/141 (61%), Gaps = 6/141 (4%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG+ +GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNP-TTQYSMPNV---SXDVSSKMLLCK--PT*STGLSRLSVMDAXLRSRXHIXVKTKPF 407
NP T + + D S+ CK P G V++ ++ + + F
Sbjct: 61 RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKG------EKRQF 114
Query: 408 SPRKSXSMVLTKMNETAEXIL 470
+P + +MVL KM ETAE L
Sbjct: 115 NPEEISAMVLQKMKETAETYL 135
Score = 77.4 bits (182), Expect = 5e-15
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NT+FDAKRL GR+F+++TVQ+D KHWPF V K I+ GE + F PEE+
Sbjct: 63 PENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEISAM 122
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLG TV++AV
Sbjct: 123 VLQKMKETAETYLGHTVKDAV 143
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 108 bits (259), Expect = 2e-24
Identities = 61/144 (42%), Positives = 87/144 (60%), Gaps = 4/144 (2%)
Frame = +3
Query: 66 MAKAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 245
M+ A+GIDLGTTYSCVG+ +GKVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1 MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60
Query: 246 MNPTTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVKTK----PFSP 413
NP + ++ + + + + T + + + + + V+ K F+
Sbjct: 61 RNP--ENTVFDAKRLIGRR--FDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNA 116
Query: 414 RKSXSMVLTKMNETAEXILAKLCR 485
+ +MVL KM ETAE +L R
Sbjct: 117 EEISAMVLQKMKETAEAVLGHSVR 140
Score = 69.3 bits (162), Expect = 1e-12
Identities = 33/81 (40%), Positives = 48/81 (59%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NT+FDAKRL GR+F++ TVQ+D+KHWPF V K ++ GE + F EE+
Sbjct: 63 PENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEISAM 122
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + LG +V++AV
Sbjct: 123 VLQKMKETAEAVLGHSVRDAV 143
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 102 bits (245), Expect = 1e-22
Identities = 61/134 (45%), Positives = 82/134 (61%), Gaps = 5/134 (3%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP- 254
+GIDLGTTYSCVGV +G+VEIIANDQGNR TPSYVAF+ ERLIGDAAKNQ+ +NP
Sbjct: 33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92
Query: 255 TTQYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXV--KTKPFSPRKSXS 428
T + + ++ + + ++D + + V +TK F+P + +
Sbjct: 93 NTIFDAKRLIGRFYNEKTVQQ---DIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSA 149
Query: 429 MVLTKMNETAEXIL 470
MVLTKM + AE L
Sbjct: 150 MVLTKMKQIAESYL 163
Score = 74.9 bits (176), Expect = 3e-14
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NTIFDAKRL GR + + TVQ D+KHWPF++V K ++ E K F PEEV
Sbjct: 91 PENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAM 150
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLG V+NAV
Sbjct: 151 VLTKMKQIAESYLGHEVKNAV 171
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 102 bits (244), Expect = 2e-22
Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP- 254
+GIDLGTTYSCVGV +G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 255 TTQYSMPN-VSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXV--KTKPFSPRKSX 425
T + + D + K + V+D + + V K F+P +
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQA----DIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Query: 426 SMVLTKMNETAEXILAK 476
+MVL KM E AE L K
Sbjct: 152 AMVLVKMKEIAESYLGK 168
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NTIFDAKRL GR + D TVQAD+KHWPF+V+ K ++ ++K F PEEV
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLGK V+NAV
Sbjct: 154 VLVKMKEIAESYLGKEVKNAV 174
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 102 bits (244), Expect = 2e-22
Identities = 63/137 (45%), Positives = 80/137 (58%), Gaps = 6/137 (4%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT--DTERLIGDAAKNQVAMNP- 254
+GIDLGTTYSCVGV +G+VEIIANDQGNR TPSYVAF+ +RLIGDAAKNQ+ +NP
Sbjct: 36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPE 95
Query: 255 TTQYSMPN-VSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXV--KTKPFSPRKSX 425
T + + D + K + V+D + + V K F+P +
Sbjct: 96 NTIFDAKRLIGRDYNDKTVQA----DIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVS 151
Query: 426 SMVLTKMNETAEXILAK 476
+MVL KM E AE L K
Sbjct: 152 AMVLVKMKEIAESYLGK 168
Score = 81.8 bits (193), Expect = 2e-16
Identities = 39/81 (48%), Positives = 50/81 (61%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFH 430
P NTIFDAKRL GR + D TVQAD+KHWPF+V+ K ++ ++K F PEEV
Sbjct: 94 PENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAM 153
Query: 431 GAYENE*NCRXYLGKTVQNAV 493
+ + YLGK V+NAV
Sbjct: 154 VLVKMKEIAESYLGKEVKNAV 174
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 63.3 bits (147), Expect = 9e-11
Identities = 53/145 (36%), Positives = 71/145 (48%), Gaps = 12/145 (8%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 NPTT-----------QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK 395
N +Y P V D+ K++ K + + S DA + ++
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDL--KVVPYK------IVKASNGDAWVEAQG----- 136
Query: 396 TKPFSPRKSXSMVLTKMNETAEXIL 470
K +SP + + VL KM ETAE L
Sbjct: 137 -KVYSPSQVGAFVLMKMKETAESYL 160
Score = 47.2 bits (107), Expect = 6e-06
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFHGA 436
NT+F KRL GR++ED VQ D+K P+++V + K + P +V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK---ASNGDAWVEAQGKVYSPSQVGAFVL 149
Query: 437 YENE*NCRXYLGKTVQNAV 493
+ + YLG TV NAV
Sbjct: 150 MKMKETAESYLGTTVNNAV 168
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 61.7 bits (143), Expect = 3e-10
Identities = 52/145 (35%), Positives = 70/145 (48%), Gaps = 12/145 (8%)
Frame = +3
Query: 72 KAPAVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 248
K +GIDLGTT SCV + ++I N +G RTTPS VAFT D ERL+G AK Q
Sbjct: 30 KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89
Query: 249 NPTT-----------QYSMPNVSXDVSSKMLLCKPT*STGLSRLSVMDAXLRSRXHIXVK 395
N +Y P V D+ K++ K + + S DA + ++
Sbjct: 90 NSANTLFATKRLIGRRYEDPEVQKDL--KVVPYK------IVKASNGDAWVEAQG----- 136
Query: 396 TKPFSPRKSXSMVLTKMNETAEXIL 470
K + P + + VL KM ETAE L
Sbjct: 137 -KEYPPSQVGAFVLMKMKETAESYL 160
Score = 44.0 bits (99), Expect = 6e-05
Identities = 26/79 (32%), Positives = 38/79 (48%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVSDGCKXKIKXXYXGEDKTFFPEEVXFHGA 436
NT+F KRL GR++ED VQ D+K P+++V + K + P +V
Sbjct: 93 NTLFATKRLIGRRYEDPEVQKDLKVVPYKIVK---ASNGDAWVEAQGKEYPPSQVGAFVL 149
Query: 437 YENE*NCRXYLGKTVQNAV 493
+ + YLG TV N V
Sbjct: 150 MKMKETAESYLGTTVNNPV 168
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 257
++GIDLGTT+SCV +G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 258 TQYSMPNV 281
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 44.4 bits (100), Expect = 5e-05
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVSD 355
N++FD KR+ GR+++D +Q DM WPF+V D
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 56.4 bits (130), Expect = 1e-08
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPT 257
++GIDLGTT+SCV +G+V I+ N+ G RTTPS +A D + LIG AK+ +
Sbjct: 2 SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIGKATN 61
Query: 258 TQYSMPNV 281
+ + + +
Sbjct: 62 SLFDVKRI 69
Score = 44.4 bits (100), Expect = 5e-05
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVSD 355
N++FD KR+ GR+++D +Q DM WPF+V D
Sbjct: 61 NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKD 93
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 45.2 bits (102), Expect = 3e-05
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 57 KYKMAKAPA--VGIDLGTTYSCVGV--XXHGKVEIIANDQGNRTTPSYVAFTDTER-LIG 221
KY + P GIDLGTTYS +G+ G+ I+ +D G ++ PS VAF LIG
Sbjct: 25 KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84
Query: 222 DAAKNQVAMNP 254
A Q NP
Sbjct: 85 TRATEQQEHNP 95
Score = 37.1 bits (82), Expect = 0.007
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 251 PHNTIFDAKRLXGRKFE--DATVQADMKHWPFEVVSDG-CKXKIKXXYXGEDKTFFPEEV 421
P TI+DAKR GR FE + +D K +PF++ D K + K +PEE+
Sbjct: 95 PKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEI 154
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 43.6 bits (98), Expect = 8e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 84 VGIDLGTTYSCVGVXXHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMN 251
+G D+G +GV G +E+I ND TP+ V+F +R +G AA+ V N
Sbjct: 4 LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTN 59
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 NTIFDAKRLXGRKFEDATVQADMKHWPFEVVS-DGCKXKIKXXYXGEDKTFFPEEV 421
NT+ + K L GRKF D Q + P +VV ++ Y GE TF PE+V
Sbjct: 62 NTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQV 117
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 35.9 bits (79), Expect = 0.016
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 81 AVGIDLGTTYSCVGVXXHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAA 230
A+ IDLGT + +G+ G ++I N + R TP+ V D R DAA
Sbjct: 26 AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAA 76
>AF039044-13|AAG24128.2| 435|Caenorhabditis elegans Hypothetical
protein F48G7.12 protein.
Length = 435
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/54 (22%), Positives = 28/54 (51%)
Frame = +3
Query: 159 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSXDVSSKMLLCKP 320
D G+ ++V D +++IG+ + + T+Y++ SS+++L +P
Sbjct: 12 DIGDGLFQTHVQLEDVQKVIGEQMNTKARLGENTKYTVIGDGNGFSSRVILVEP 65
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 136 GRWRSSPTTR-ATGPLRLMLRSQTPSVXSEMPPRT 237
G W R ATGP + + +Q P + S MPP T
Sbjct: 84 GSWSVEIQERIATGPPQKPISAQKPEIQSPMPPMT 118
>AF022979-6|ABD94088.1| 94|Caenorhabditis elegans Hypothetical
protein T02B11.8 protein.
Length = 94
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -3
Query: 260 CCGVHRHLVLGGISDXTLGVCERNIRRSGPVA 165
CC H G S T+G C+R S PV+
Sbjct: 58 CCPGTNHCCPPGFSCTTIGTCKRTTTLSNPVS 89
>Z81592-7|CAB63314.1| 436|Caenorhabditis elegans Hypothetical
protein T16G1.7 protein.
Length = 436
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/54 (20%), Positives = 26/54 (48%)
Frame = +3
Query: 159 DQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTTQYSMPNVSXDVSSKMLLCKP 320
D G+ ++V D + +IG+ + + T+Y++ S+++L +P
Sbjct: 12 DNGDGLFQTHVQLDDVQDVIGEQMNTEARLGKNTKYTVVGDGNGFMSRVILVEP 65
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 27.1 bits (57), Expect = 7.4
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2
Query: 53 LKIQNGKSTRSRNRSGYHVLLRWCLXXREGGDHRQRPGQQDHSVLCCVHR 202
LK NGK T+SRN+ V RE D Q+P Q D +L V R
Sbjct: 176 LKETNGKVTKSRNQLSERVSELEAQLKRE-ADTAQKPKQADPDLLNKVGR 224
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 288 PMRRLASNIVLWGSSPPGSWRHLRXDAR 205
P RR +++ G P GSW+ L+ R
Sbjct: 117 PQRRTGYRVIVEGLPPTGSWQDLKDHMR 144
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 312 TVASSNLRPMRRLASNIVLWG 250
T SN P+R++ S+IV+WG
Sbjct: 269 TGKGSNETPIRKIVSSIVIWG 289
>AL021497-4|CAA16407.1| 386|Caenorhabditis elegans Hypothetical
protein Y51A2D.8 protein.
Length = 386
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2
Query: 126 RHQRKSTWYPDRFLLR 79
RH+R+ST YPD F LR
Sbjct: 139 RHKRRSTRYPDYFDLR 154
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 288 PMRRLASNIVLWGSSPPGSWRHLRXDAR 205
P RR +++ G P GSW+ L+ R
Sbjct: 117 PQRRTGYRVIVEGLPPTGSWQDLKDHMR 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,106,375
Number of Sequences: 27780
Number of extensions: 215412
Number of successful extensions: 475
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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