Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0600.Seq
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   6.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   6.8  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    22   9.0  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 255 KGIFFLDQACVKVCSRLNDDSWKH*TK 335
           +GI+  +   VK+    ++DSWK  T+
Sbjct: 167 RGIWHGESVAVKIFFSRDEDSWKRETE 193


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 424 FHLKHVRGKHNHFRQFFYLGRF 359
           FHL  V   H +FR++ ++  F
Sbjct: 923 FHLSQVLTGHGYFREYLHVCGF 944


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -3

Query: 454 DEHRQCQQHXFHLKHVRGKHNHFRQFFYL 368
           D+H       FHL+   G    F  F+YL
Sbjct: 912 DDHYVPSGFFFHLRKNMGGLKRFSTFYYL 940


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,293
Number of Sequences: 2352
Number of extensions: 9031
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)