Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0599.Seq
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.24 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.2  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.1  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +1

Query: 274 LPLGTVLGLGTFAAIQKGHLKPNP 345
           +P G  + +GTF   ++ H+ PNP
Sbjct: 434 IPAGCTVVIGTFKLHRQPHIYPNP 457


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 91  FNLVIKYLNYE*F 129
           FN VIKY+N++ F
Sbjct: 3   FNNVIKYINFDRF 15


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 190 EWVWFTGSRRCWTLLIPVG 134
           EW W   ++ C   L PVG
Sbjct: 38  EWKWNDIAKECEQFLGPVG 56


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 381 LLPMSPLXMAKSWVWFQMSLLNS 313
           +L + P   +    WFQMS+ N+
Sbjct: 115 ILDLVPNHTSDQHKWFQMSINNT 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,219
Number of Sequences: 438
Number of extensions: 1583
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)