Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0598.Seq
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.36 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.5  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   4.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 407 NTGHAFVQYTADTEHR 360
           N GH F+ Y  D +HR
Sbjct: 364 NMGHVFISYIHDPDHR 379


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +3

Query: 114 HGLDSKS*VL--SSCVNDREFIHGCGSRDHP 200
           HGL++ + ++     VN+   +HG   RD+P
Sbjct: 184 HGLETLNQLIWFDEVVNELRILHGVEIRDYP 214


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +2

Query: 317 RSCDASRKLNEDPSCDARYLRCI 385
           ++C  S+ + ++P CD     CI
Sbjct: 1   KNCSESKAICDNPPCDDEVESCI 23


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 169  LFMAVGLGITLYYLVGTGQLQ 231
            LF+A       YYL   GQLQ
Sbjct: 2241 LFVADDTNCAQYYLCNQGQLQ 2261


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 407 NTGHAFVQYTADTEHR 360
           N GH  + Y  D +HR
Sbjct: 364 NMGHILIGYIHDPDHR 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,444
Number of Sequences: 336
Number of extensions: 2482
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)