Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0597.Seq
(469 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 5.0
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 5.0
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 5.0
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 5.0
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 5.0
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 5.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 5.0
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 21 8.7
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.7
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.7
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.7
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 22.6 bits (46), Expect = 2.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 165 KKNASNNHFHVTLHNNKEANNLHLKIYIPFNIK 263
K N +NN+++ +NN NN Y NI+
Sbjct: 330 KYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIE 362
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +3
Query: 171 NASNNHFHVTLHNNKEANNLH 233
N +NN + H++ ++NN H
Sbjct: 440 NQNNNQHNDQAHHSSKSNNRH 460
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 219 ANNLHLKIYIPFNIK*ICYVVQYI 290
+NN + Y N K +CY + YI
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYI 109
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 219 ANNLHLKIYIPFNIK*ICYVVQYI 290
+NN + Y N K +CY + YI
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYI 109
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 219 ANNLHLKIYIPFNIK*ICYVVQYI 290
+NN + Y N K +CY + YI
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYI 109
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 219 ANNLHLKIYIPFNIK*ICYVVQYI 290
+NN + Y N K +CY + YI
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYI 109
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.4 bits (43), Expect = 5.0
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +3
Query: 219 ANNLHLKIYIPFNIK*ICYVVQYI 290
+NN + Y N K +CY + YI
Sbjct: 86 SNNYNYSNYNNNNYKQLCYNINYI 109
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 5.0
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +3
Query: 198 TLHNNKEANNLHLKIY 245
T+HNN N + K+Y
Sbjct: 322 TIHNNNNYKNYNKKLY 337
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 20.6 bits (41), Expect = 8.7
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 26 YLVHHIVMKKLNLC*YFV 79
Y +HH ++ K N C F+
Sbjct: 21 YCLHHKILIKKNKCNAFI 38
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 168 KNASNNHFHVTLHNNKEANNLHLKIYIPFN 257
K NN+ + +NN NN K+Y N
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 168 KNASNNHFHVTLHNNKEANNLHLKIYIPFN 257
K NN+ + +NN NN K+Y N
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 8.7
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 168 KNASNNHFHVTLHNNKEANNLHLKIYIPFN 257
K NN+ + +NN NN K+Y N
Sbjct: 88 KTIHNNNNYKYNYNNNNYNNNCKKLYYNIN 117
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,110
Number of Sequences: 438
Number of extensions: 2271
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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