Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0595.Seq
         (489 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chai...    28   7.9  
M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chai...    28   7.9  
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot...    28   7.9  
AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-P...    28   7.9  

>M96388-1|AAA28662.1| 3712|Drosophila melanogaster laminin A chain
            protein.
          Length = 3712

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
 Frame = +3

Query: 66   CQYCSYTSWGYNSDGCCKCRXDSKILCR*IEC---TGRCR 176
            C  C+   W Y  DGC  C  +     R   C   TG+C+
Sbjct: 2046 CDRCAVDHWKYEKDGCTPCNCNQG-YSRGFGCNPNTGKCQ 2084


>M75882-1|AAA28661.1| 1951|Drosophila melanogaster laminin A chain
           protein.
          Length = 1951

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
 Frame = +3

Query: 66  CQYCSYTSWGYNSDGCCKCRXDSKILCR*IEC---TGRCR 176
           C  C+   W Y  DGC  C  +     R   C   TG+C+
Sbjct: 285 CDRCAVDHWKYEKDGCTPCNCNQG-YSRGFGCNPNTGKCQ 323


>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
          Length = 3712

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
 Frame = +3

Query: 66   CQYCSYTSWGYNSDGCCKCRXDSKILCR*IEC---TGRCR 176
            C  C+   W Y  DGC  C  +     R   C   TG+C+
Sbjct: 2046 CDRCAVDHWKYEKDGCTPCNCNQG-YSRGFGCNPNTGKCQ 2084


>AE014296-1101|AAF50672.2| 3712|Drosophila melanogaster CG10236-PA
            protein.
          Length = 3712

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
 Frame = +3

Query: 66   CQYCSYTSWGYNSDGCCKCRXDSKILCR*IEC---TGRCR 176
            C  C+   W Y  DGC  C  +     R   C   TG+C+
Sbjct: 2046 CDRCAVDHWKYEKDGCTPCNCNQG-YSRGFGCNPNTGKCQ 2084


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,823,362
Number of Sequences: 53049
Number of extensions: 163578
Number of successful extensions: 857
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)