Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0591.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   0.34 
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.8  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   5.6  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   5.6  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.4  
AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.           22   9.8  
AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.           22   9.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         22   9.8  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 27.1 bits (57), Expect = 0.34
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +2

Query: 35  LSYPSLTFRNPKITIDLPYSALSTVDNMD 121
           L+Y +L F  P IT+DL ++++  +D  D
Sbjct: 544 LTYANLQFLAPAITVDLRHNSIFEIDLAD 572


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -2

Query: 140 FFCKETNPCCRQ*TRHCKVGQLLSSD 63
           +FC   NP  R   + C  G LL S+
Sbjct: 677 WFCLAMNPLSRTLNQQCNFGYLLKSE 702


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 401 LLSICQCFVLMITLLVQLNK*INK*NSIVRTISECLEHIQ 282
           LL+IC   ++ + +L    K +    S ++++ +C E++Q
Sbjct: 6   LLTICVLALMPLEVLSNDTKGLTIEKSFLQSVHDCAEYLQ 45


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/40 (25%), Positives = 23/40 (57%)
 Frame = -2

Query: 401 LLSICQCFVLMITLLVQLNK*INK*NSIVRTISECLEHIQ 282
           LL+IC   ++ + +L    K +    S ++++ +C E++Q
Sbjct: 6   LLTICVLALMPLEVLSNDTKGLTIEKSFLQSVHDCAEYLQ 45


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -3

Query: 469 FFFIFDVNALSIAPIIEVTSAMNFCQFVN 383
           +F +   NA+     +  T+ +++C F+N
Sbjct: 659 YFLLVTSNAVQHQEYLNTTALISYCDFLN 687


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -3

Query: 469 FFFIFDVNALSIAPIIEVTSAMNFCQFVN 383
           +F +   NA+     +  T+ +++C F+N
Sbjct: 659 YFLLVTSNAVQHQEYLNTTALISYCDFLN 687


>AY341213-1|AAR13777.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 77  IDLPYSALSTVDNMD*SLYKR 139
           ++LPYSA  + DN D   Y++
Sbjct: 140 LELPYSAGPSADNADDGPYQQ 160


>AY341212-1|AAR13776.1|  260|Anopheles gambiae SRPN9 protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +2

Query: 77  IDLPYSALSTVDNMD*SLYKR 139
           ++LPYSA  + DN D   Y++
Sbjct: 140 LELPYSAGPSADNADDGPYQQ 160


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 370 INTKH*QIDKSSWQMSPQL*VQSTVH*HQK*KKN 471
           +N KH  +D +S +    L VQS  H H+    N
Sbjct: 485 LNLKHKVVDNASAEGGGTLGVQSPRHGHESRANN 518


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,962
Number of Sequences: 2352
Number of extensions: 9041
Number of successful extensions: 36
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)