Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0591.Seq
         (489 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    26   0.25 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 25.8 bits (54), Expect = 0.25
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +1

Query: 343 LLSCTNKVIINTKH*QIDKSSWQMS 417
           +L   NKVII+ K+  I+K  WQ++
Sbjct: 232 VLHSINKVIIHPKYDIIEKDDWQIN 256


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -2

Query: 233 IVTIKSEHFYHLSTRLNFESNS*M*DNKFIYFFCKETNPCC 111
           I+T  S  FY+LST +N    + M  NKF   F      CC
Sbjct: 328 ILTYMSGVFYYLSTTVNPLLYNIM-SNKFREAFKLMLPNCC 367


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,951
Number of Sequences: 438
Number of extensions: 2368
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)