Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0590.Seq
(486 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E4A7EB Cluster: PREDICTED: hypothetical protein;... 43 0.004
UniRef50_UPI000023D0F7 Cluster: hypothetical protein FG03178.1; ... 38 0.12
UniRef50_UPI0000EBD753 Cluster: PREDICTED: hypothetical protein;... 37 0.21
UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein MAL7P1... 35 0.85
UniRef50_UPI0000D9FA77 Cluster: PREDICTED: hypothetical protein,... 35 1.1
UniRef50_Q4DDC0 Cluster: Putative uncharacterized protein; n=3; ... 34 1.5
UniRef50_Q1AGV9 Cluster: Lysine-rich matrix protein-2; n=3; Pinc... 34 1.5
UniRef50_A4RQF0 Cluster: Predicted protein; n=1; Ostreococcus lu... 34 2.0
UniRef50_Q60UU1 Cluster: Putative uncharacterized protein CBG198... 34 2.0
UniRef50_A7T4Y0 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.0
UniRef50_A7SXY5 Cluster: Predicted protein; n=2; Nematostella ve... 34 2.0
UniRef50_Q98549 Cluster: A499L protein; n=2; Chlorovirus|Rep: A4... 33 2.6
UniRef50_Q4Q0V5 Cluster: Putative uncharacterized protein; n=3; ... 33 2.6
UniRef50_Q8YTS0 Cluster: Microcystin synthetase B; n=3; Nostocac... 33 3.4
UniRef50_Q1NL98 Cluster: GTP diphosphokinase; n=2; delta proteob... 33 4.5
UniRef50_UPI00015ADE50 Cluster: hypothetical protein NEMVEDRAFT_... 32 6.0
UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454; ... 32 6.0
UniRef50_Q7UXX7 Cluster: Putative uncharacterized protein; n=1; ... 32 6.0
UniRef50_O16857 Cluster: Aggregation factor protein 3, form C; n... 32 6.0
UniRef50_UPI0000D56375 Cluster: PREDICTED: hypothetical protein;... 32 7.9
UniRef50_UPI000051AB47 Cluster: PREDICTED: similar to CG2162-PA;... 32 7.9
UniRef50_A7BE71 Cluster: Putative uncharacterized protein; n=1; ... 32 7.9
UniRef50_A7T2G6 Cluster: Predicted protein; n=2; Nematostella ve... 32 7.9
>UniRef50_UPI0000E4A7EB Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 805
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = -1
Query: 228 CYWNCRWMIHFHHDC-WNCIHKYCYRQMFWIL---RCLSLNQCYWNCRWMIHFHHDCCNY 61
C++NC + I F + C +NC + C+ F+++ C L C++NC ++I F CNY
Sbjct: 21 CFFNCFYCICFFYICFFNCFYLICFCNYFYLIYFFNCFYL-ICFFNCFYLICF----CNY 75
Query: 60 IHKCYY 43
+ Y+
Sbjct: 76 FYLIYF 81
>UniRef50_UPI000023D0F7 Cluster: hypothetical protein FG03178.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG03178.1 - Gibberella zeae PH-1
Length = 595
Score = 37.9 bits (84), Expect = 0.12
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 34 HLAVVALMDIVTTVV-MEVYHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVPTVVME--VY 204
H +VV + + T+VV + V P VPVTLI TQ + P V V + + T V+E V
Sbjct: 252 HTSVVENVVVHTSVVEVPVEKPVEVPVTLIHTQIMEVPVEKPVEVPVTVIHTSVVEVPVE 311
Query: 205 HPPAVPVT 228
P VPVT
Sbjct: 312 KPVEVPVT 319
Score = 32.3 bits (70), Expect = 6.0
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = +1
Query: 34 HLAVVALMDIVTTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVPTVVMEVYHPP 213
H +VV + + V + V H VPV ++ TQT + P + ++ VV V
Sbjct: 302 HTSVVEV-PVEKPVEVPVTHTVEVPVQVVHTQTVEQPVEVIHTQTVEKPVEVVHTVEVEK 360
Query: 214 AVPVTLIQTQTAQ 252
V VT+I T T Q
Sbjct: 361 PVHVTVIHTVTEQ 373
>UniRef50_UPI0000EBD753 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 471
Score = 37.1 bits (82), Expect = 0.21
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 PIQTQTAQDPEHLAVVALMDIVTTVVMEVYHP-PAVPVTLIQTQTAKDPEHLAVAVLMDT 177
PIQT A P H A + + T+ + H P P+T IQT A P H +
Sbjct: 279 PIQT-IALSPRHRFPCAPLTPIQTIALSPRHRFPCTPLTPIQT-IALSPRHRFPCTPLTP 336
Query: 178 VPTVVMEVYHP-PAVPVTLIQT 240
+ T+ + H P P+T IQT
Sbjct: 337 IQTIALSPRHRFPCTPLTPIQT 358
Score = 35.5 bits (78), Expect = 0.64
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 1 PIQTQTAQDPEHLAVVALMDIVTTVVMEVYHP-PAVPVTLIQTQTAKDPEHLAVAVLMDT 177
PIQT A P H + + T+ + H P P+T IQT A P H +
Sbjct: 222 PIQT-IALSPRHRFPCTPLTPIQTIALSPRHRFPCTPLTPIQT-IALSPRHRFPCTPLTP 279
Query: 178 VPTVVMEVYHP-PAVPVTLIQT 240
+ T+ + H P P+T IQT
Sbjct: 280 IQTIALSPRHRFPCAPLTPIQT 301
Score = 33.1 bits (72), Expect = 3.4
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 1 PIQTQTAQDPEHLAVVALMDI----VTTVVMEVYHP-PAVPVTLIQTQTAKDPEHLAVAV 165
PIQT A P H V D + T+ + H P P+T IQT A P H
Sbjct: 199 PIQT-IALSPRHRFPVHTTDTPLTPIQTIALSPRHRFPCTPLTPIQT-IALSPRHRFPCT 256
Query: 166 LMDTVPTVVMEVYHP-PAVPVTLIQT 240
+ + T+ + H P P+T IQT
Sbjct: 257 PLTPIQTIALSPRHRFPCTPLTPIQT 282
>UniRef50_Q8IBJ2 Cluster: Putative uncharacterized protein
MAL7P1.146; n=2; Plasmodium|Rep: Putative
uncharacterized protein MAL7P1.146 - Plasmodium
falciparum (isolate 3D7)
Length = 4894
Score = 35.1 bits (77), Expect = 0.85
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -2
Query: 407 NCLHESCYRRISWILRCLNSNQCYWNCRWMIHFHHDCW--NCIHKCCYH 267
NCLH +C CL++N + NC H++C NC+H C H
Sbjct: 337 NCLHNNCLHN-----NCLHNNCLHNNCPHNNCLHNNCLHNNCLHNNCLH 380
>UniRef50_UPI0000D9FA77 Cluster: PREDICTED: hypothetical protein,
partial; n=1; Macaca mulatta|Rep: PREDICTED:
hypothetical protein, partial - Macaca mulatta
Length = 127
Score = 34.7 bits (76), Expect = 1.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 88 YHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVP--TVVMEVYHPPAVPVTL 231
+HPPAV +TL + + P H A+++ P + +HPPA+ +TL
Sbjct: 10 HHPPAVIITLQPSSSPSSPHHHPPALIITLQPSSSPSSRHHHPPALIITL 59
Score = 34.7 bits (76), Expect = 1.1
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 88 YHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVPTVVMEV--YHPPAVPVTL 231
+HPPAV +TL + + P H A+++ P+ +HPPA+ +TL
Sbjct: 70 HHPPAVIITLQPSSSPSSPHHHPPALIITLQPSSSPSSPHHHPPALIITL 119
>UniRef50_Q4DDC0 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 362
Score = 34.3 bits (75), Expect = 1.5
Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Frame = -1
Query: 237 LNQCYWNCRWMIHFHHDC---WNCIHKYCYRQMF---WILRCLSLNQCYWNCRWMIHFHH 76
L C W C W+ C + C+ Y ++ W+ C+ L C W C W+
Sbjct: 142 LYACVWLCVWLYACVWLCVWLYACVWLYACVWLYACVWLYACVWLYACVWLCVWLY---- 197
Query: 75 DCCNYIHKC-YYRQMFWILRCLSL 7
C +++ C + W+ C+ L
Sbjct: 198 -ACVWLYACVWLYACVWLYACVWL 220
>UniRef50_Q1AGV9 Cluster: Lysine-rich matrix protein-2; n=3;
Pinctada fucata|Rep: Lysine-rich matrix protein-2 -
Pinctada fucata (Pearl oyster)
Length = 101
Score = 34.3 bits (75), Expect = 1.5
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 467 NLNQCYWNCRWSIHFHHD-SWNCLHESCYRRISWILRCLNSNQCY 336
NLN C+W +W + H W C + CY + W L + Y
Sbjct: 26 NLNICWWKLKWCLKKCHPWDWKC-KKKCYWKYKWCLHKFGGHYPY 69
>UniRef50_A4RQF0 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 484
Score = 33.9 bits (74), Expect = 2.0
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 82 EVYHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVPTVVMEVYHPPAVPVTLIQTQT-AQDQ 258
E + P + L++T AK P H +A DT+P V +E + P V + QT D
Sbjct: 330 ETWFVPTGSMQLMETLHAKRPNHRFIAADFDTLPNVRIEGVNAPLVATQRVGGQTDDHDT 389
Query: 259 YI 264
Y+
Sbjct: 390 YL 391
>UniRef50_Q60UU1 Cluster: Putative uncharacterized protein CBG19823;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG19823 - Caenorhabditis
briggsae
Length = 585
Score = 33.9 bits (74), Expect = 2.0
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = -1
Query: 174 IHKYCYRQMFWILRCLSLNQCYWNCRWMIHFHHDCCNYIHKCYYRQ--MFWILRCLS 10
I +YC+ WI + + + C + + F H C +IHKC YR+ F++L CL+
Sbjct: 386 IERYCFT--CWIPKTSNSHHCSQCDKCVDGFDHHC-PWIHKCVYRKNLRFFVLFCLT 439
>UniRef50_A7T4Y0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 77
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -2
Query: 440 RWSIHFHHDSWNCLHESCYRRISWILRCLNS--NQCYWNCRWMIHFHH 303
RWS+H ++ W+ H + W L N + +++ RW +H+HH
Sbjct: 15 RWSLHHYNPRWSLRH----YHLRWSLHHYNPRWSLSHYHPRWSLHYHH 58
>UniRef50_A7SXY5 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 280
Score = 33.9 bits (74), Expect = 2.0
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = -1
Query: 201 HFHHDCWNCIHKYCYRQMFWILR--CLSLNQCYWNCRWMIHFHHDCCNYIHKCYYRQMFW 28
H + C +Y Y + F ++ C CY C + ++H C Y +C +R ++
Sbjct: 113 HLYRSCHRVCRRYRYCKSFLFIKHKCHYKYHCYLKCSCKVKYYH--CRYRRRCVWRYKYY 170
>UniRef50_Q98549 Cluster: A499L protein; n=2; Chlorovirus|Rep: A499L
protein - Paramecium bursaria Chlorella virus 1 (PBCV-1)
Length = 77
Score = 33.5 bits (73), Expect = 2.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 192 HDCWNCIHKYCYRQMFWILRCLSLNQCY-WNCRWMIHFHHDCCNYIHKCYYRQMFWILRC 16
+ C + +Y Y+ + + LRCL L Q Y C ++ C Y +C Y + + LRC
Sbjct: 10 YQCLQHLFRYSYQHLQFSLRCLCLYQQYPLQCLYL------CLLYPLQCLYLCLLYPLRC 63
Query: 15 LSL 7
L L
Sbjct: 64 LCL 66
>UniRef50_Q4Q0V5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 816
Score = 33.5 bits (73), Expect = 2.6
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = -2
Query: 407 NCLHESCYRRISWILRCLNSNQCYWNCRWMIHFHHDCWNCIHKCCYHQMYWSCA 246
N L + R + LR + ++ NCR+ H C C H C+ M+ SCA
Sbjct: 483 NGLVDMQMRPYVYALRRVGKHKYAMNCRFCQHVGGRCVQCSHPHCFEAMHASCA 536
>UniRef50_Q8YTS0 Cluster: Microcystin synthetase B; n=3;
Nostocaceae|Rep: Microcystin synthetase B - Anabaena sp.
(strain PCC 7120)
Length = 1102
Score = 33.1 bits (72), Expect = 3.4
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 85 VYHPPAVPVTLIQTQTAKDPEH-LAVAVLMDTVPTVVMEVYHPPAVPVTLIQTQTAQDQY 261
V+ +P ++ QT D E + + + +++ T ++ PP + +TLIQ +
Sbjct: 83 VFRQVEIPWKILDWQTISDAEQQVELEIFLESDRTFSFDIKQPPLLRLTLIQLSATKYIL 142
Query: 262 IWW*QHL 282
IW HL
Sbjct: 143 IWTQHHL 149
>UniRef50_Q1NL98 Cluster: GTP diphosphokinase; n=2; delta
proteobacterium MLMS-1|Rep: GTP diphosphokinase - delta
proteobacterium MLMS-1
Length = 736
Score = 32.7 bits (71), Expect = 4.5
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 85 VYHPPAVPVTLIQTQTAKDPEHLAVAVLMDTVPTV 189
+ HP V + L++ +DPE LA AVL DT+ V
Sbjct: 81 ISHPLQVALILVEELDVRDPEILAAAVLHDTIEDV 115
>UniRef50_UPI00015ADE50 Cluster: hypothetical protein
NEMVEDRAFT_v1g69851; n=1; Nematostella vectensis|Rep:
hypothetical protein NEMVEDRAFT_v1g69851 - Nematostella
vectensis
Length = 138
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -1
Query: 231 QCYWNCRWMIHFHHDCWNCIHKYCYRQMFWILRCLSLNQCYWNCRWMIHFHHDC-CNYIH 55
+C+ NC H + C + +C RC S C ++ +H DC C Y
Sbjct: 3 RCHSNCHCRCHSNCHCRYHSNCHCRYHSNCHCRCHSNCHCRYHSNCHCRYHSDCHCRYHS 62
Query: 54 KCYYR 40
C+ R
Sbjct: 63 NCHCR 67
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Frame = -2
Query: 473 CLNLNQCYWNCRWSIHF-HHDSWNC-LHESCYRRISWILRCLNSNQCYWNCRWMIHFHHD 300
C + C+ C + H +H + +C H +C+ R C + C+ CR +H D
Sbjct: 2 CRCHSNCHCRCHSNCHCRYHSNCHCRYHSNCHCRCHSNCHCRYHSNCH--CR----YHSD 55
Query: 299 CWNCIHKCCYHQMYWSC 249
C H C+ + + C
Sbjct: 56 CHCRYHSNCHCRYHSDC 72
>UniRef50_UPI000057C40A Cluster: hypothetical protein MS53_0454;
n=1; Mycoplasma synoviae 53|Rep: hypothetical protein
MS53_0454 - Mycoplasma synoviae 53
Length = 208
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/69 (24%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -1
Query: 234 NQCYWNCRWMIHFH-HDCWNCIHKYCYRQMFWILRCLSLNQC-YWNCRWMIHFHHDCCNY 61
N C+W C + +F+ +NC + YR F+ R C ++N R +F+ N+
Sbjct: 141 NFCFWCCNFFFYFNCRSFFNCF-CFSYRSSFFTRRFFYFFTCNFFNRRSFFNFYFFRSNF 199
Query: 60 IHKCYYRQM 34
C++ +
Sbjct: 200 SCFCFWNSL 208
>UniRef50_Q7UXX7 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 480
Score = 32.3 bits (70), Expect = 6.0
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -3
Query: 346 ISVTGTAGG*YTFITTVGTVSISAATTRCTGPALFEFESVLLELPVDD 203
+ +TG AG + F T+ + A TRC G E + + ELP D
Sbjct: 384 LGLTGPAGSMFQFATSTAWTATETADTRCWGLLPREIQVLRAELPAGD 431
>UniRef50_O16857 Cluster: Aggregation factor protein 3, form C; n=4;
Microciona prolifera|Rep: Aggregation factor protein 3,
form C - Microciona prolifera (Red beard sponge)
Length = 2205
Score = 32.3 bits (70), Expect = 6.0
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 109 VTLIQTQTAKDPEHLAVAVLMDTVPTVVMEVYHPPAVPVTLIQTQTA 249
VTLI +DPEH+ + + T P VV++ PP V + + TA
Sbjct: 893 VTLIADDILEDPEHIFANLEIPTTPRVVID---PPQTQVNITDSDTA 936
>UniRef50_UPI0000D56375 Cluster: PREDICTED: hypothetical protein;
n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
protein - Tribolium castaneum
Length = 469
Score = 31.9 bits (69), Expect = 7.9
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +1
Query: 4 IQTQTAQDPEHLAVVALMDIVTTVVMEVYHPPAVPVTLIQTQTAKDPEHLAVA------V 165
+ Q AQ P AVV + + T + PP PV ++Q + P AVA +
Sbjct: 130 VHEQVAQFPYPAAVVEEIQPIVTEYNYNF-PPVAPVEIVQPVVSTHPYPPAVADEIKTPI 188
Query: 166 LMD---TVPTVVMEVYHPPAVPVTLIQ 237
+ D +P V + +PPA PV ++Q
Sbjct: 189 VTDYHYNLPAVEIVKPYPPAAPVEVVQ 215
>UniRef50_UPI000051AB47 Cluster: PREDICTED: similar to CG2162-PA;
n=2; Apocrita|Rep: PREDICTED: similar to CG2162-PA -
Apis mellifera
Length = 656
Score = 31.9 bits (69), Expect = 7.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +1
Query: 121 QTQTAKDPEHLAVAVLMDTVPTVVMEVYHPPAVPVTLIQTQTAQDQ 258
Q + PE + + M + PTV E+Y PPAV + QT DQ
Sbjct: 130 QRSPSASPERIRIQKQMKSTPTV--EIYRPPAVRRARNELQTNMDQ 173
>UniRef50_A7BE71 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 866
Score = 31.9 bits (69), Expect = 7.9
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 291 VPTVVMKVYHPPAVPVT--LIRIQTA*DPGNPTVAALMKTVPRVVMKMYRPPAVPVTLIQ 464
+PT+ V HPP +PVT L I A PG A++ P PPAV V L Q
Sbjct: 1 MPTLDELVSHPPHLPVTRALSDIAAAARPGG---CAVITAPPGTGKTTLLPPAVAVALAQ 57
Query: 465 IQAA 476
AA
Sbjct: 58 HDAA 61
>UniRef50_A7T2G6 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 388
Score = 31.9 bits (69), Expect = 7.9
Identities = 19/75 (25%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Frame = -2
Query: 452 YWNC-RWSIHFHHDSWNCLHESCYRRISWILRCLNSNQ----CYWNC-RWMIHFHHDCWN 291
+W C RW+ W C +C+ R +W C N +W C RW W
Sbjct: 16 WWACWRWNSWTRSTWWACWRRNCWTRGTW-WACWRWNSWTRGTWWACWRWNSWTRGTWWA 74
Query: 290 CIHKCCYHQ-MYWSC 249
C + + + +W+C
Sbjct: 75 CWRRNSWTRGNWWAC 89
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,937,064
Number of Sequences: 1657284
Number of extensions: 7483186
Number of successful extensions: 22828
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 17279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22711
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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