Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0585.Seq
         (492 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   4.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.1  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -1

Query: 156 FGVTRFEINVCDLST*FSESIL*VLSLH 73
           FGV  +    CD++T     +  VLSLH
Sbjct: 307 FGVLAYYSTTCDIATILDFWVRCVLSLH 334


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 125 HTLISNLVTPKVGSDCLKKTPLKKW 199
           H  +SN  T  + S+ L   P +KW
Sbjct: 60  HVSVSNTNTEPLLSEALTNLPGEKW 84


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 411 PLHYFRAFSFYRLVS 367
           P H++ AFS Y L S
Sbjct: 309 PTHFYCAFSLYPLKS 323


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 261 QAVEDDLRIAYLNLSIFNLFN 199
           + V D +R  Y+N++  +LFN
Sbjct: 491 KTVSDGIRHYYVNVTFPHLFN 511


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,930
Number of Sequences: 336
Number of extensions: 1709
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11525470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)