Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0585.Seq
         (492 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC066945-1|AAH66945.1|  582|Homo sapiens LARP7 protein protein.        29   6.6  
BC037876-1|AAH37876.1|  531|Homo sapiens C17orf57 protein protein.     29   8.8  
BC036407-1|AAH36407.1|  973|Homo sapiens chromosome 17 open read...    29   8.8  
AK096373-1|BAC04770.1|  204|Homo sapiens protein ( Homo sapiens ...    29   8.8  

>BC066945-1|AAH66945.1|  582|Homo sapiens LARP7 protein protein.
          Length = 582

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 23/66 (34%), Positives = 31/66 (46%)
 Frame = +1

Query: 67  EKMKREDLKDALTKLGAEVAYIDFKSGDTEGWVRLSKENAAKEMVEKIEDGKIKICDSEV 246
           EK KR  +K  L  +  +V   DF  GD      L K+   +E +EK  DG + I    V
Sbjct: 24  EKKKRSRVKQVLADIAKQV---DFWFGDAN----LHKDRFLREQIEKSRDGYVDI-SLLV 75

Query: 247 IFNCLK 264
            FN +K
Sbjct: 76  SFNKMK 81


>BC037876-1|AAH37876.1|  531|Homo sapiens C17orf57 protein protein.
          Length = 531

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +1

Query: 127 YIDFKSGDTEGWVRLSKENAAKE---MVEKIEDGKIKICDSEVIFNCLKVTM 273
           YIDF+   +   ++L K N  KE   ++  +++GKI I D E    CL V +
Sbjct: 394 YIDFRKEASN--LKLPKVNEIKEAANILSHVDNGKIGIPDLEHALKCLNVNL 443


>BC036407-1|AAH36407.1|  973|Homo sapiens chromosome 17 open reading
           frame 57 protein.
          Length = 973

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +1

Query: 127 YIDFKSGDTEGWVRLSKENAAKE---MVEKIEDGKIKICDSEVIFNCLKVTM 273
           YIDF+   +   ++L K N  KE   ++  +++GKI I D E    CL V +
Sbjct: 743 YIDFRKEASN--LKLPKVNEIKEAANILSHVDNGKIGIPDLEHALKCLNVNL 792


>AK096373-1|BAC04770.1|  204|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39054 fis, clone NT2RP7012516. ).
          Length = 204

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
 Frame = -2

Query: 293 FSEIRFLIVTFKQ--LKMTSESHILIFPSSIFST-ISLAAFSLDSLTQPSVSPDLKSMYA 123
           FS +  L   F    L + S S + +  SS FS+  S +  SL SL  PS  P     + 
Sbjct: 27  FSPLSLLFFLFSSVFLFLFSSSPLPLSLSSFFSSSFSFSFSSLLSLFLPSFFPSFLPSFL 86

Query: 122 TSAPNLVRASFKSSLFIFSLTSLKWKTL 39
            S P  +  S   SLF+F    L W++L
Sbjct: 87  PSFPPSLPPS---SLFLFLSFFLVWQSL 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,255,722
Number of Sequences: 237096
Number of extensions: 947818
Number of successful extensions: 2730
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2730
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)