Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0584.Seq
         (485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   0.60 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   4.2  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   4.2  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   5.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.2 bits (55), Expect = 0.60
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +2

Query: 251 QRPDRGQQGRPDFRQQGQFSGNQQEGAYRRVMNXRKNQESNDGPPNXRQNFNQPKEXMRX 430
           Q+  R QQ R   RQQ Q    QQ+   +R    R+ Q+        +Q   Q ++  + 
Sbjct: 318 QQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQ 377

Query: 431 E 433
           +
Sbjct: 378 Q 378



 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = +2

Query: 251 QRPDRGQQGRPDFRQQGQFSGNQQEGAYRRVMNXRKNQESNDGPPNXRQNFNQPKEXM 424
           QR  + QQ +   +QQ Q    QQ+   ++    +++Q+        +Q   QP++ +
Sbjct: 326 QRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQQQWQQQQQQQQQPRQSL 383


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 15/63 (23%), Positives = 30/63 (47%)
 Frame = +2

Query: 251 QRPDRGQQGRPDFRQQGQFSGNQQEGAYRRVMNXRKNQESNDGPPNXRQNFNQPKEXMRX 430
           Q+  R QQ +   R+Q Q    QQ+   ++    ++NQ+  +     +Q  +Q +E  + 
Sbjct: 219 QQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQ-REWQQQQQQQQHQQREQQQQ 277

Query: 431 EFV 439
           + V
Sbjct: 278 QRV 280


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 22/93 (23%), Positives = 32/93 (34%)
 Frame = +2

Query: 191  KRQARCEATRTFWFWK*TNGQRPDRGQQGRPDFRQQGQFSGNQQEGAYRRVMNXRKNQES 370
            KRQ   E T+   F+     +   +G +GR D+      SG +  G            E 
Sbjct: 876  KRQEYKEKTKNALFFAEPAPEAKKKGGRGRKDYISDSDASGGEVGG------GGGSGGEE 929

Query: 371  NDGPPNXRQNFNQPKEXMRXEFVGVTVXKKKXR 469
              G P  R+   + K        G    K+K R
Sbjct: 930  GSGAPKERKRKGEKKPRKSQGGGGSRKRKEKAR 962


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -1

Query: 206 ILPAVLPPTLSVAHLTITKAF 144
           +LP     +L V HLT++K+F
Sbjct: 21  LLPTGCDASLDVPHLTLSKSF 41


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,372
Number of Sequences: 2352
Number of extensions: 7086
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)