Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0580.Seq
(473 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6 prot... 79 6e-15
M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6 prot... 79 6e-15
BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein. 79 6e-15
BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6 pr... 79 6e-15
AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6 pr... 79 6e-15
BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6 pr... 78 1e-14
M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein. 77 3e-14
J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein. 74 2e-13
AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein. 37 0.041
>X67309-1|CAA47719.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>M77232-1|AAA60289.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC094826-1|AAH94826.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC071908-1|AAH71908.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC071907-1|AAH71907.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC027620-1|AAH27620.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 43.2 bits (97), Expect = 5e-04
Identities = 45/126 (35%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE++
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEARE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC009427-1|AAH09427.2| 247|Homo sapiens RPS6 protein protein.
Length = 247
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 124 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 175
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 107 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 162
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 163 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 220
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 221 KRQEQI 226
>BC000524-1|AAH00524.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>AL391834-6|CAM21143.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>AL391834-5|CAM21142.1| 218|Homo sapiens ribosomal protein S6
protein.
Length = 218
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 95 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 146
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 78 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 133
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 134 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 191
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 192 KRQEQI 197
>AB062123-1|BAB93455.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 79.4 bits (187), Expect = 6e-15
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>BC013296-1|AAH13296.1| 249|Homo sapiens ribosomal protein S6
protein.
Length = 249
Score = 78.2 bits (184), Expect = 1e-14
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK KPR +APKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK---KPRTRAPKIQ 177
Score = 44.4 bits (100), Expect = 2e-04
Identities = 46/126 (36%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQ--TRAPSQG 299
L LVIV+KG ++IPGLT T P R + ++ RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRLGP--KRASRIRKLFNLSKEDDVRQYVVRKPLNK 164
Query: 298 RKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESKV 119
+K +T RLVTP VLQ K AEYAKLLA+R KE+K
Sbjct: 165 EGKK--PRTRAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Query: 118 RRQEEI 101
+RQE+I
Sbjct: 223 KRQEQI 228
>M20020-1|AAA60288.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 77.0 bits (181), Expect = 3e-14
Identities = 41/56 (73%), Positives = 46/56 (82%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRK FNLSKEDDVR+YVV++ L KEGK KPR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKRFNLSKEDDVRQYVVRKPL-NKEGK---KPRTKAPKIQ 177
Score = 45.6 bits (103), Expect = 9e-05
Identities = 49/129 (37%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*WKCTPPSRSQTCFQNP*AVQP*QRR*CTSL---CRQ--TRAP 308
L LVIV+KG ++IPGLT T P R P ++R S RQ R P
Sbjct: 109 LNLVIVKKGEKDIPGLT--DTTVPRRL-----GPKRASRIRKRFNLSKEDDVRQYVVRKP 161
Query: 307 SQGRKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKE 128
+K +T RLVTP VLQ K AEYAKLLA+R KE
Sbjct: 162 LNKEGKK--PRTKAPKIQRLVTPRVLQHKRRRIALKQQRTKKNKEEAAEYAKLLAKRMKE 219
Query: 127 SKVRRQEEI 101
+K +RQE+I
Sbjct: 220 AKEKRQEQI 228
>J03537-1|AAA60287.1| 249|Homo sapiens RPS6 protein.
Length = 249
Score = 74.1 bits (174), Expect = 2e-13
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIR 253
D VPRRLGPKRAS+IRKLFNLSKEDDVR VV++ L KEGK +PR KAPKI+
Sbjct: 126 DTTVPRRLGPKRASRIRKLFNLSKEDDVRECVVRKPL-NKEGK---RPRTKAPKIQ 177
Score = 41.9 bits (94), Expect = 0.001
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = -2
Query: 472 LALVIVRKGAQEIPGLT*W---KCTPPSRSQTCFQNP*AVQP*QRR*CTSLCRQTRAPSQ 302
L LVIV+KG ++IPGLT + P R+ + + R C R P
Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRECV-----VRKPLN 163
Query: 301 GRKRKC*TQT*GT*DPRLVTPVVLQXXXXXXXXXXXXXXXXKSSEAEYAKLLAQRKKESK 122
++ +T RLVTP VLQ K AEYAKLLA+R K++K
Sbjct: 164 KEGKR--PRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKQAK 221
Query: 121 VRRQEEI 101
+RQE+I
Sbjct: 222 EKRQEQI 228
>AF274945-1|AAK07522.1| 79|Homo sapiens PNAS-20 protein.
Length = 79
Score = 36.7 bits (81), Expect = 0.041
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -3
Query: 420 DGNVPRRLGPKRASKIRKLF 361
D VPRRLGPK AS+IRKLF
Sbjct: 55 DTTVPRRLGPKEASRIRKLF 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,397,370
Number of Sequences: 237096
Number of extensions: 1179927
Number of successful extensions: 2659
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2645
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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