Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0579.Seq
         (487 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.79 
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   1.8  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   4.2  
AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative 5-oxoprol...    23   7.3  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    23   7.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.3  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 0.79
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -2

Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQ 58
           GL  R+ +RG    P     + + + D+G+   PG  G       PG +G+
Sbjct: 451 GLSGRKGDRGVPGSPGLPATVAAIKGDKGEPGFPGAIGRPGKVGVPGLSGE 501



 Score = 23.0 bits (47), Expect = 5.6
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 143 LSSRPCASGRDDAPRSTSRAGSP 211
           L  RP  +GRD  P  T   G P
Sbjct: 551 LPGRPGKTGRDGPPGLTGEKGEP 573


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 17/54 (31%), Positives = 22/54 (40%)
 Frame = -2

Query: 216 ASGLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQE 55
           A GLP R+ E+G   RP   G        +G+    GE G       PG  G +
Sbjct: 545 APGLPGRDGEKGEPGRPGLPGA-------KGERGLKGELGGRCTDCRPGMKGDK 591


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 12/54 (22%), Positives = 27/54 (50%)
 Frame = -3

Query: 242 MYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCI 81
           M+  ++  +R   +L     ++ + QK  V   +SN+ +A   + ++Q   RC+
Sbjct: 315 MWQLSDGTKRARVRLPAKAAKQLVGQKLTVSCCISNIKEAPAINLQQQRCYRCL 368


>AJ441131-8|CAD29637.1|  756|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 756

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 195 EVERGASSRPEAHGRLDSEQRDQGDH 118
           E+  GA++RP    RLD+ Q    +H
Sbjct: 703 EIGTGAAARPRVDERLDAVQLSIFNH 728


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -2

Query: 195 EVERGASSRPEAHGRLDSEQRDQGDH 118
           E+  GA++RP    RLD+ Q    +H
Sbjct: 747 EIGTGAAARPRVDERLDAVQLSIFNH 772


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 441  LPLGWTRKLKRPRTNGXKVGTKP*KHWRTQL 349
            +PLG    L   R N  K+G+K   +W TQ+
Sbjct: 915  MPLGCL--LDYVRNNKDKIGSKALLNWSTQI 943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,902
Number of Sequences: 2352
Number of extensions: 7705
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42708759
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)