Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0579.Seq
(487 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011453-1|AAR99111.1| 243|Drosophila melanogaster RE36486p pro... 94 8e-20
BT004878-1|AAO45234.1| 159|Drosophila melanogaster GM13038p pro... 94 8e-20
AE014296-1727|AAN11955.1| 159|Drosophila melanogaster CG8189-PB... 94 8e-20
AE014296-1726|AAF50212.1| 243|Drosophila melanogaster CG8189-PA... 94 8e-20
Y08967-1|CAA70164.1| 184|Drosophila melanogaster Fo-ATP synthas... 89 2e-18
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 4.5
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 4.5
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 4.5
AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p pro... 29 4.5
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 4.5
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 4.5
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 4.5
AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA... 29 4.5
AY051786-1|AAK93210.1| 349|Drosophila melanogaster LD30520p pro... 28 5.9
AE014297-1883|AAF55085.1| 349|Drosophila melanogaster CG3508-PA... 28 5.9
AE014297-1882|AAN13614.1| 360|Drosophila melanogaster CG3508-PB... 28 5.9
BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p pro... 28 7.8
BT001551-1|AAN71306.1| 360|Drosophila melanogaster RE11603p pro... 28 7.8
BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p pro... 28 7.8
AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1 p... 28 7.8
AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,... 28 7.8
AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,... 28 7.8
>BT011453-1|AAR99111.1| 243|Drosophila melanogaster RE36486p
protein.
Length = 243
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -3
Query: 254 RERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 75
RER M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIAD
Sbjct: 173 RERAMNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIAD 232
Query: 74 LASLA 60
L++LA
Sbjct: 233 LSALA 237
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 472 VCSSREIRTKVAAWLDKEVEATENEWXEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQA 293
+ + +++ +A W D E++ E+EW EGR +K L DAIE EK EQWRA G LL++A
Sbjct: 100 IIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEA 159
Query: 292 KKENVLLQLEAA 257
KKEN+ LQLEAA
Sbjct: 160 KKENIALQLEAA 171
>BT004878-1|AAO45234.1| 159|Drosophila melanogaster GM13038p
protein.
Length = 159
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -3
Query: 254 RERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 75
RER M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIAD
Sbjct: 89 RERAMNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIAD 148
Query: 74 LASLA 60
L++LA
Sbjct: 149 LSALA 153
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 472 VCSSREIRTKVAAWLDKEVEATENEWXEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQA 293
+ + +++ +A W D E++ E+EW EGR +K L DAIE EK EQWRA G LL++A
Sbjct: 16 IIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEA 75
Query: 292 KKENVLLQLEAA 257
KKEN+ LQLEAA
Sbjct: 76 KKENIALQLEAA 87
>AE014296-1727|AAN11955.1| 159|Drosophila melanogaster CG8189-PB,
isoform B protein.
Length = 159
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -3
Query: 254 RERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 75
RER M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIAD
Sbjct: 89 RERAMNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIAD 148
Query: 74 LASLA 60
L++LA
Sbjct: 149 LSALA 153
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 472 VCSSREIRTKVAAWLDKEVEATENEWXEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQA 293
+ + +++ +A W D E++ E+EW EGR +K L DAIE EK EQWRA G LL++A
Sbjct: 16 IIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEA 75
Query: 292 KKENVLLQLEAA 257
KKEN+ LQLEAA
Sbjct: 76 KKENIALQLEAA 87
>AE014296-1726|AAF50212.1| 243|Drosophila melanogaster CG8189-PA,
isoform A protein.
Length = 243
Score = 94.3 bits (224), Expect = 8e-20
Identities = 42/65 (64%), Positives = 55/65 (84%)
Frame = -3
Query: 254 RERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 75
RER M Y+EVKRRLDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIAD
Sbjct: 173 RERAMNVYSEVKRRLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIAD 232
Query: 74 LASLA 60
L++LA
Sbjct: 233 LSALA 237
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 472 VCSSREIRTKVAAWLDKEVEATENEWXEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQA 293
+ + +++ +A W D E++ E+EW EGR +K L DAIE EK EQWRA G LL++A
Sbjct: 100 IIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEA 159
Query: 292 KKENVLLQLEAA 257
KKEN+ LQLEAA
Sbjct: 160 KKENIALQLEAA 171
>Y08967-1|CAA70164.1| 184|Drosophila melanogaster Fo-ATP synthase
subunit b protein.
Length = 184
Score = 89.4 bits (212), Expect = 2e-18
Identities = 40/65 (61%), Positives = 53/65 (81%)
Frame = -3
Query: 254 RERLMYAYTEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 75
RER M Y+EV R LDYQ+E +VERRL+QKHMV+WI +NV +I+P QEK+ L++CIAD
Sbjct: 114 RERAMNVYSEVNRPLDYQVECRHVERRLSQKHMVNWITTNVLASISPQQEKETLNKCIAD 173
Query: 74 LASLA 60
L++LA
Sbjct: 174 LSALA 178
Score = 83.8 bits (198), Expect = 1e-16
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = -1
Query: 472 VCSSREIRTKVAAWLDKEVEATENEWXEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQA 293
+ + +++ +A W D E++ E+EW EGR +K L DAIE EK EQWRA G LL++A
Sbjct: 41 IIAVKKLGPVIAKWADGEIDKIESEWKEGREAELKVLSDAIEAEKKEQWRADGALLLMEA 100
Query: 292 KKENVLLQLEAA 257
KKEN+ LQLEAA
Sbjct: 101 KKENIALQLEAA 112
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AY118400-1|AAM48429.1| 608|Drosophila melanogaster RE60058p
protein.
Length = 608
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 245 LMYAYTEVKRRLDYQLEKSNVERRL-AQKHMVDWIVSNVTKAITPDQEKQALDRCI 81
L Y Y++ ++R + ER L A H +D ++S + + PD D C+
Sbjct: 19 LAYKYSQFRQRRREAASRRVTERELSALHHKIDKLLSKLEEESEPDPPTSQEDECV 74
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/57 (33%), Positives = 27/57 (47%)
Frame = -2
Query: 210 GLPAREVERGASSRPEAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPGFAGQEVNGSE 40
GL R+ E G PE LD ++ ++G GPG+ G PG GQ+ + E
Sbjct: 307 GLVGRKGEPG----PEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKGDRGE 359
>AE013599-2369|AAF57936.2| 608|Drosophila melanogaster CG8910-PA
protein.
Length = 608
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 245 LMYAYTEVKRRLDYQLEKSNVERRL-AQKHMVDWIVSNVTKAITPDQEKQALDRCI 81
L Y Y++ ++R + ER L A H +D ++S + + PD D C+
Sbjct: 19 LAYKYSQFRQRRREAASRRVTERELSALHHKIDKLLSKLEEESEPDPPTSQEDECV 74
>AY051786-1|AAK93210.1| 349|Drosophila melanogaster LD30520p
protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 373 RFGSDLRSIRSRSLQLPCPTKRQLWSEFHVSYIHHD 480
R S + +RSRSL +P T R L E H+S +H D
Sbjct: 80 RQNSRTKLVRSRSLLVPYNTNRFLMEE-HMSELHKD 114
>AE014297-1883|AAF55085.1| 349|Drosophila melanogaster CG3508-PA,
isoform A protein.
Length = 349
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 373 RFGSDLRSIRSRSLQLPCPTKRQLWSEFHVSYIHHD 480
R S + +RSRSL +P T R L E H+S +H D
Sbjct: 80 RQNSRTKLVRSRSLLVPYNTNRFLMEE-HMSELHKD 114
>AE014297-1882|AAN13614.1| 360|Drosophila melanogaster CG3508-PB,
isoform B protein.
Length = 360
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 373 RFGSDLRSIRSRSLQLPCPTKRQLWSEFHVSYIHHD 480
R S + +RSRSL +P T R L E H+S +H D
Sbjct: 91 RQNSRTKLVRSRSLLVPYNTNRFLMEE-HMSELHKD 125
>BT003171-1|AAO24926.1| 443|Drosophila melanogaster SD07604p
protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 165 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPG 70
E HG+ + Q G G G GP H GPG
Sbjct: 258 EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
>BT001551-1|AAN71306.1| 360|Drosophila melanogaster RE11603p
protein.
Length = 360
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 373 RFGSDLRSIRSRSLQLPCPTKRQLWSEFHVSYIHHD 480
R S + +RSRSL +P T R L E H+S +H D
Sbjct: 91 RQNSRTKLVRSRSLLVPYNTDRFLMEE-HMSELHKD 125
>BT001477-1|AAN71232.1| 443|Drosophila melanogaster LD21345p
protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 165 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPG 70
E HG+ + Q G G G GP H GPG
Sbjct: 258 EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
>AL023893-1|CAA19655.1| 485|Drosophila melanogaster EG:132E8.1
protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 165 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPG 70
E HG+ + Q G G G GP H GPG
Sbjct: 258 EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
>AE014298-190|AAS65244.1| 443|Drosophila melanogaster CG3056-PB,
isoform B protein.
Length = 443
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 165 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPG 70
E HG+ + Q G G G GP H GPG
Sbjct: 258 EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
>AE014298-189|AAF45613.1| 485|Drosophila melanogaster CG3056-PA,
isoform A protein.
Length = 485
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 165 EAHGRLDSEQRDQGDHSGPGEAGAGPLHRGPG 70
E HG+ + Q G G G GP H GPG
Sbjct: 258 EEHGKAKAAQFMAQIGGGNGGGGGGPPHMGPG 289
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,550,551
Number of Sequences: 53049
Number of extensions: 363137
Number of successful extensions: 2269
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2262
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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