Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0521.Seq
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 104 8e-22
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 95 6e-19
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 92 4e-18
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 85 9e-16
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 81 8e-15
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 80 2e-14
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 80 2e-14
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 73 4e-12
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 70 2e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 60 2e-08
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 59 4e-08
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 58 7e-08
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 56 3e-07
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 55 8e-07
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 54 1e-06
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 54 2e-06
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 51 1e-05
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 51 1e-05
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 50 2e-05
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 49 5e-05
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 48 1e-04
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 46 3e-04
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 46 5e-04
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 45 7e-04
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 45 9e-04
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 44 0.001
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 44 0.002
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 43 0.003
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 43 0.004
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 42 0.005
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 42 0.005
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 41 0.011
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 41 0.014
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 40 0.019
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 39 0.058
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 38 0.13
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.23
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 36 0.41
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 36 0.41
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 36 0.54
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 36 0.54
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 35 0.94
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 35 0.94
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 35 0.94
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 34 1.6
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 33 2.2
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 33 2.9
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 33 3.8
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 32 5.0
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 32 6.6
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 104 bits (250), Expect = 8e-22
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E EIIDF LG L DEVLKIMPVQK TRAGQR RFKAFVAIG NGH GLGVKCSKEVA
Sbjct: 89 KESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVA 148
Query: 432 XXXRGA 449
RGA
Sbjct: 149 TAIRGA 154
Score = 58.0 bits (134), Expect = 9e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
+ KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 56 EDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 95.1 bits (226), Expect = 6e-19
Identities = 48/66 (72%), Positives = 49/66 (74%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E EIIDF LG L DEVLKIMPVQK T AGQ RFKAFV IG NGH GL VKCSKEVA
Sbjct: 29 KESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDYNGHVGLSVKCSKEVA 88
Query: 432 XXXRGA 449
RGA
Sbjct: 89 TAIRGA 94
Score = 45.6 bits (103), Expect = 5e-04
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1
Query: 169 VPVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
+PVTKLG L+ + KI LE IYLFSLPIK S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 92.3 bits (219), Expect = 4e-18
Identities = 42/66 (63%), Positives = 53/66 (80%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E++I+D+ L P L DEV+K++PVQK TRAGQR RFKAFV IG +GH GLG+KC+KEVA
Sbjct: 63 KEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVA 121
Query: 432 XXXRGA 449
RGA
Sbjct: 122 TAIRGA 127
Score = 59.7 bits (138), Expect = 3e-08
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = +1
Query: 151 EDQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
+++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK
Sbjct: 29 DEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 84.6 bits (200), Expect = 9e-16
Identities = 41/76 (53%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Frame = +3
Query: 225 EHLLVF-FTNQEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXG 401
EH+ +F +E +I++ +G L DEV+KI PVQK T AGQR RFKAFV +G NGH G
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 402 LGVKCSKEVAXXXRGA 449
LGVK KEVA +G+
Sbjct: 129 LGVKACKEVAHSIQGS 144
Score = 54.4 bits (125), Expect = 1e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 151 EDQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 81.4 bits (192), Expect = 8e-15
Identities = 40/51 (78%), Positives = 41/51 (80%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGL 404
+E EIIDF LG L DEVLKIMPVQK TRAGQR RFKAFVAIG NGH GL
Sbjct: 64 KESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGL 114
Score = 58.8 bits (136), Expect = 5e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
+ KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 31 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/51 (78%), Positives = 40/51 (78%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
DEVLKIMPVQK T AGQR RF AFVAIG NGH GLGVKCSKEVA R A
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREA 98
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 80.2 bits (189), Expect = 2e-14
Identities = 40/64 (62%), Positives = 46/64 (71%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+EF+IID L P L DEV+ I PVQK TRAGQR RFKA V +G NGH GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 432 XXXR 443
R
Sbjct: 123 GAIR 126
Score = 52.4 bits (120), Expect = 4e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
++K WVPVTKLGRLV+ GKI +E I+L SLP+K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 72.5 bits (170), Expect = 4e-12
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXG 401
+E EIIDF LG L DEVLKIMPV+K TRAGQR RFKAFVAI NG+ G
Sbjct: 17 KESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDYNGYAG 66
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 70.1 bits (164), Expect = 2e-11
Identities = 34/66 (51%), Positives = 41/66 (62%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E EI+D G + +EVL I VQK TRAGQ+ R KA V +G GH G+G K SKE A
Sbjct: 50 REPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAA 109
Query: 432 XXXRGA 449
RGA
Sbjct: 110 SAIRGA 115
Score = 36.7 bits (81), Expect = 0.23
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 151 EDQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
+++ EW+P T +GRLV+ KI LE I+ FS I+
Sbjct: 16 KEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIR 50
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 60.5 bits (140), Expect = 2e-08
Identities = 30/59 (50%), Positives = 39/59 (66%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+EFE+ DF LG L D+VLK+M VQK +AG+R RFK V I N + LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKEL 208
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 59.3 bits (137), Expect = 4e-08
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFK 362
+E EIIDF LG L DEVLKIMPVQK TRAGQR RFK
Sbjct: 89 KESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 58.8 bits (136), Expect = 5e-08
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
+ KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 56 EDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 58.4 bits (135), Expect = 7e-08
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+E++I+D L L +E L I PVQK T AGQ+ RFKA+V +G + H GLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEV 150
Score = 52.4 bits (120), Expect = 4e-06
Identities = 22/33 (66%), Positives = 29/33 (87%)
Frame = +1
Query: 157 QKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIK 93
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 56.4 bits (130), Expect = 3e-07
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
+ KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 56 EDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 54.8 bits (126), Expect = 8e-07
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
+ KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 56 EDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
Score = 50.4 bits (115), Expect = 2e-05
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +3
Query: 261 EIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFK 362
EIIDF LG L +EVLK MPVQK TRAGQ RFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 54.0 bits (124), Expect = 1e-06
Identities = 30/59 (50%), Positives = 38/59 (64%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+EFEI DF L L D+VLKI+P+ + R Q RF +F I GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSRF-RNDQWTRFNSFDTIN-YGGHNGIGVKCSKKV 77
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 53.6 bits (123), Expect = 2e-06
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = +3
Query: 324 QKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRG 446
QK T+ GQ+ R K F G NGH GLG+KCSKEVA +G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQG 41
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+EFE+ DF L L D+VLK+M V+K AG+ RFK V I N + LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKEL 74
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 51.2 bits (117), Expect = 1e-05
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +3
Query: 255 EFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAX 434
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G NG+ G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 435 XXRGA 449
R A
Sbjct: 105 AIRKA 109
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/69 (39%), Positives = 38/69 (55%)
Frame = -1
Query: 449 SASXXXGDFLAALHTQTXMTVXXANGNKCLETXALXGTCXFLNRHDL*NLIXQXRXEXEI 270
S + G FLAAL QT + V +G++ LE L GT L+ HDL + + Q + EI
Sbjct: 48 SPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEI 107
Query: 269 NDLEFLIGK 243
+DLE G+
Sbjct: 108 DDLELFNGQ 116
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 50.0 bits (114), Expect = 2e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E EI+D L P L D+VL + +Q+ T +G+R RF +G +G+ GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 432 XXXRGA 449
R A
Sbjct: 80 STIRKA 85
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 48.8 bits (111), Expect = 5e-05
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 348 RXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
+ RFKAFVAIG NG G GVKCSKE A RGA
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGA 94
Score = 33.5 bits (73), Expect = 2.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 154 DQKEWVPVTKLGRLVREGKI 213
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 157 QKEWVPVTKLGRLVREGKIXXLESIYLFSLPIKNSRSL 270
+ +W+P+TKLG LV+E KI LE IY FSL +N RSL
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSL 88
Score = 35.5 bits (78), Expect = 0.54
Identities = 19/38 (50%), Positives = 23/38 (60%)
Frame = +3
Query: 318 PVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
P+ K T Q+ RFKA V +G GH LG+K S EVA
Sbjct: 95 PLIKQTCTDQQTRFKASVTVGSY-GHVSLGIKYSMEVA 131
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 46.4 bits (105), Expect = 3e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVA 431
+E++I+D+ + P L DEV+ I Q+ T +G+R + +G NG+ G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 432 XXXRGA 449
+ A
Sbjct: 93 PAIKKA 98
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 160 KEWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
+EW P T+LGRLV G+I + LP+K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 45.6 bits (103), Expect = 5e-04
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
QE II L P L EV+ + +QK T GQ RFKA VA G NG+ G+G SK++
Sbjct: 75 QEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQM 132
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/51 (47%), Positives = 31/51 (60%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGL 404
+E++I+D L L +EV+ I VQK T G+ R KA VAIG NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 37.9 bits (84), Expect = 0.10
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 172 PVTKLGRLVREGKIXXLESIYLFSLPIK 255
PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 44.8 bits (101), Expect = 9e-04
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXG 401
+E EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G +G+ G
Sbjct: 87 KEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLG 135
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 44.4 bits (100), Expect = 0.001
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 282 GPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
GP ++VL++ + K + G+ F+A VA+G NG GLG +KEV
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEV 116
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 44.0 bits (99), Expect = 0.002
Identities = 26/59 (44%), Positives = 34/59 (57%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
QE II L P L EV+ + +QK T GQ RFKA VA G NG+ G+G +K++
Sbjct: 56 QESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/53 (50%), Positives = 31/53 (58%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGV 410
+E EIID LG L DEVLK +P QK TR GQ +KA G NGH G+
Sbjct: 77 KETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL 123
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 172 PVTKLGRLVREGKIXXLESIYLFSLPIKNS 261
P +KLG LV++ +I L IYLFSLPIK +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 42.7 bits (96), Expect = 0.004
Identities = 20/63 (31%), Positives = 38/63 (60%)
Frame = +3
Query: 237 VFFTNQEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKC 416
+FF N + +++ G L +V++ + V + T++G++ + K V +G +GH GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 417 SKE 425
S +
Sbjct: 150 SMD 152
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 42.3 bits (95), Expect = 0.005
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +1
Query: 166 WVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
W PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 42.3 bits (95), Expect = 0.005
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +3
Query: 252 QEFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXG 401
+E E++D L P L DEVL I VQ+ T +G+R +F+ VA+G +G G
Sbjct: 36 KESEVVD-QLVPDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 41.1 bits (92), Expect = 0.011
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 252 QEFEIIDFXL---GPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSK 422
+E EIID L EVL I + T +G+R RF+ A+G +G+ GLG+ K
Sbjct: 45 KEPEIIDVLLPEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHGK 104
Query: 423 EVAXXXRGA 449
EV R A
Sbjct: 105 EVGIAIRKA 113
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 163 EWVPVTKLGRLVREGKIXXLESIYLFSLPIK 255
EW P TKLG +V+EG+I + I+ IK
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 40.7 bits (91), Expect = 0.014
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +3
Query: 255 EFEIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
E EI+D L P L EV+ I VQK T AG+ R+K V +G +G+ +G +K++
Sbjct: 43 EPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQL 99
Score = 34.7 bits (76), Expect = 0.94
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 160 KEWVPVTKLGRLVREGKIXXLESIYLFSLPI 252
+EW P T +G LV+EGKI ++ ++ +LPI
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPI 41
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 40.3 bits (90), Expect = 0.019
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 291 LXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
L + V+ + V K + G+R RF A V +G NGH G G ++EV
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEV 57
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 38.7 bits (86), Expect = 0.058
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
+ ++KI V K T+ G++ F+A V IG NG G+GV +++V + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 37.5 bits (83), Expect = 0.13
Identities = 22/48 (45%), Positives = 26/48 (54%)
Frame = +3
Query: 306 LKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
++I +K T AGQ+ RFKAFV NGH L EVA RGA
Sbjct: 13 IRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 36.7 bits (81), Expect = 0.23
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 160 KEWVPVTKLGRLVREGKIXXLESI 231
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 35.9 bits (79), Expect = 0.41
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -1
Query: 254 LIGKENK*MLSSXXIFPSRTRRPSLVTGTHSFWS 153
L GKE K + S I P+ T PSLVTGTH F S
Sbjct: 20 LTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 35.9 bits (79), Expect = 0.41
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+++L + K + G+R RF A V +G NG G+G+ +KEV
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEV 62
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 35.5 bits (78), Expect = 0.54
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+ V+++ V K + G++ F+A V +G G G+GV +KEV
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEV 229
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 35.5 bits (78), Expect = 0.54
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+ V+++ V K + G++ +F+A V +G G+ G+G +KEV
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEV 192
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 34.7 bits (76), Expect = 0.94
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 270 DFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
DF G + ++++ V K + G+ F+ IG NG G+G + +EVA + A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 34.7 bits (76), Expect = 0.94
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+ V+ I V K + G+R F A V +G NG G+G +KEV
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEV 87
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 34.7 bits (76), Expect = 0.94
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+ V++I V K + G++ F+A + +G NG G+GV + +V
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDV 111
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 33.9 bits (74), Expect = 1.6
Identities = 24/56 (42%), Positives = 29/56 (51%)
Frame = +3
Query: 261 EIIDFXLGPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
+II+F LG L DEVL+ M Q QR R K F + + L V CSKEV
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEV 100
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXR 443
+ V++I V K + G++ F+A V +G G G+GV + +V R
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVR 67
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
+++LKI V K T+ G+ F A+G G GLG+ + V R A
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKA 61
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 32.7 bits (71), Expect = 3.8
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 282 GPXLXDEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEV 428
G L ++++ I V K + G+R F A V +G G G G ++EV
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREV 104
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 32.3 bits (70), Expect = 5.0
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXRGA 449
D+++ I V K + G+R F A V +G G G G ++EV R A
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKA 74
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 297 DEVLKIMPVQKXTRAGQRXRFKAFVAIGXXNGHXGLGVKCSKEVAXXXR 443
++V+KI V K + G+R F A +G G G+G + EV R
Sbjct: 32 EKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIR 80
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 280,429,784
Number of Sequences: 1657284
Number of extensions: 3037142
Number of successful extensions: 5257
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5256
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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