Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0520.Seq
(548 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 127 2e-29
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 127 2e-29
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 127 2e-29
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 127 2e-29
BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein. 127 2e-29
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 127 2e-29
AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein. 111 2e-24
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 109 6e-24
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 70 5e-12
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 68 2e-11
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 68 2e-11
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 68 2e-11
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 68 2e-11
BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor, mi... 40 0.004
AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1 pr... 40 0.004
AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G pro... 40 0.004
BC030612-1|AAH30612.1| 777|Homo sapiens G elongation factor, mi... 32 1.2
BC015712-1|AAH15712.1| 779|Homo sapiens GFM2 protein protein. 32 1.2
AF367997-1|AAK53401.1| 779|Homo sapiens elongation factor G2 pr... 32 1.2
AF111808-1|AAL39010.1| 732|Homo sapiens MSTP027 protein. 32 1.2
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 479 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 538
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 539 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 572
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 571 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 630
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 631 RARYLAEKYEWDVAEARK 648
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 479 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 538
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 539 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 572
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 571 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 630
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 631 RARYLAEKYEWDVAEARK 648
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 479 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 538
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 539 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 572
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 571 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 630
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 631 RARYLAEKYEWDVAEARK 648
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 138 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 197
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 198 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 231
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 230 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 289
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 290 RARYLAEKYEWDVAEARK 307
>BC006547-1|AAH06547.1| 583|Homo sapiens EEF2 protein protein.
Length = 583
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 479 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 538
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 539 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 572
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 127 bits (307), Expect = 2e-29
Identities = 65/94 (69%), Positives = 70/94 (74%)
Frame = +2
Query: 35 LGKTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIN 214
L KTGTI T ++AHNM+VMK S PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI
Sbjct: 479 LVKTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCII 538
Query: 215 EESGEHIVVGAGEXILRSXXRXLRRTMXXXAIKK 316
EESGEHI+ GAGE L + L IKK
Sbjct: 539 EESGEHIIAGAGELHLEICLKDLEEDHACIPIKK 572
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 571 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 630
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 631 RARYLAEKYEWDVAEARK 648
>AY309238-1|AAR16191.1| 151|Homo sapiens antigen MLAA-42 protein.
Length = 151
Score = 111 bits (266), Expect = 2e-24
Identities = 51/79 (64%), Positives = 61/79 (77%)
Frame = +3
Query: 309 SRSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFK 488
S+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 5 SQKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELK 64
Query: 489 TRARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 65 ARARYLAEKYEWDVAEARK 83
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 109 bits (262), Expect = 6e-24
Identities = 50/78 (64%), Positives = 60/78 (76%)
Frame = +3
Query: 312 RSDDPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDIDEGRVNPRDDFKT 491
+ DPVVSYRETV+EES+ LCLSK PNKHNRL+MKA+ PDGL EDID+G V+ R + K
Sbjct: 71 KKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQ 130
Query: 492 RARXLTKSTEYDVTEXRK 545
RAR L + E+DV E RK
Sbjct: 131 RARYLAEKYEWDVAEARK 148
Score = 99.1 bits (236), Expect = 9e-21
Identities = 50/70 (71%), Positives = 52/70 (74%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVVGAGEXILRSXXRXLR 286
PVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQCI EESGEHI+ GAGE L + L
Sbjct: 3 PVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLE 62
Query: 287 RTMXXXAIKK 316
IKK
Sbjct: 63 EDHACIPIKK 72
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 70.1 bits (164), Expect = 5e-12
Identities = 31/75 (41%), Positives = 52/75 (69%)
Frame = +2
Query: 41 KTGTIXTXKNAHNMKVMKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEE 220
K+ T+ + + + P+VRVAVEPK+P+++P+LV+G+K L ++DP VQ + +E
Sbjct: 331 KSATLCSLPSCPPFIPLNFEATPIVRVAVEPKHPSEMPRLVKGMKLLNQADPCVQILIQE 390
Query: 221 SGEHIVVGAGEXILR 265
+GEH++V AGE L+
Sbjct: 391 TGEHVLVTAGEVHLQ 405
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 41 KTGTIXTXKNAHNMKV---MKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 211
KT TI + ++ +K + V+++AVEP NP++LPK+++GL+++ KS P +
Sbjct: 566 KTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTK 625
Query: 212 NEESGEHIVVGAGEXILRSXXRXLRRTMXXXAIK 313
EESGEH+++G GE L LR+ IK
Sbjct: 626 VEESGEHVILGTGELYLDCVMHDLRKMYSEIDIK 659
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 321 DPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDID 455
DPVV++ ETV E S C ++ PNK N++ M A+ + GL EDI+
Sbjct: 662 DPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 706
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 41 KTGTIXTXKNAHNMKV---MKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 211
KT TI + ++ +K + V+++AVEP NP++LPK+++GL+++ KS P +
Sbjct: 561 KTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTK 620
Query: 212 NEESGEHIVVGAGEXILRSXXRXLRRTMXXXAIK 313
EESGEH+++G GE L LR+ IK
Sbjct: 621 VEESGEHVILGTGELYLDCVMHDLRKMYSEIDIK 654
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 321 DPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDID 455
DPVV++ ETV E S C ++ PNK N++ M A+ + GL EDI+
Sbjct: 657 DPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 701
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 41 KTGTIXTXKNAHNMKV---MKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 211
KT TI + ++ +K + V+++AVEP NP++LPK+++GL+++ KS P +
Sbjct: 561 KTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTK 620
Query: 212 NEESGEHIVVGAGEXILRSXXRXLRRTMXXXAIK 313
EESGEH+++G GE L LR+ IK
Sbjct: 621 VEESGEHVILGTGELYLDCVMHDLRKMYSEIDIK 654
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 321 DPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDID 455
DPVV++ ETV E S C ++ PNK N++ M A+ + GL EDI+
Sbjct: 657 DPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 701
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 68.1 bits (159), Expect = 2e-11
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Frame = +2
Query: 41 KTGTIXTXKNAHNMKV---MKXSXXPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCI 211
KT TI + ++ +K + V+++AVEP NP++LPK+++GL+++ KS P +
Sbjct: 439 KTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTK 498
Query: 212 NEESGEHIVVGAGEXILRSXXRXLRRTMXXXAIK 313
EESGEH+++G GE L LR+ IK
Sbjct: 499 VEESGEHVILGTGELYLDCVMHDLRKMYSEIDIK 532
Score = 47.6 bits (108), Expect = 3e-05
Identities = 21/45 (46%), Positives = 30/45 (66%)
Frame = +3
Query: 321 DPVVSYRETVAEESDQLCLSKXPNKHNRLFMKAQXMPDGLPEDID 455
DPVV++ ETV E S C ++ PNK N++ M A+ + GL EDI+
Sbjct: 535 DPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIE 579
>BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor,
mitochondrial 1 protein.
Length = 751
Score = 40.3 bits (90), Expect = 0.004
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGEXILRSXXRXL 283
PV+ +A++P N DL K +G+ R + DP + + E+ E ++ G GE L + L
Sbjct: 449 PVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRL 508
Query: 284 RR 289
R
Sbjct: 509 ER 510
>AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1
protein.
Length = 751
Score = 40.3 bits (90), Expect = 0.004
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGEXILRSXXRXL 283
PV+ +A++P N DL K +G+ R + DP + + E+ E ++ G GE L + L
Sbjct: 449 PVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRL 508
Query: 284 RR 289
R
Sbjct: 509 ER 510
>AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G
protein.
Length = 751
Score = 40.3 bits (90), Expect = 0.004
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGEXILRSXXRXL 283
PV+ +A++P N DL K +G+ R + DP + + E+ E ++ G GE L + L
Sbjct: 449 PVISIAMKPSNKNDLEKFSKGIGRFTREDPTFKVYFDTENKETVISGMGELHLEIYAQRL 508
Query: 284 RR 289
R
Sbjct: 509 ER 510
>BC030612-1|AAH30612.1| 777|Homo sapiens G elongation factor,
mitochondrial 2 protein.
Length = 777
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGE 253
PV +EP + + P L LK L + DP ++ ++ +SG+ ++ G GE
Sbjct: 488 PVFFCTIEPPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQTVLCGMGE 537
>BC015712-1|AAH15712.1| 779|Homo sapiens GFM2 protein protein.
Length = 779
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGE 253
PV +EP + + P L LK L + DP ++ ++ +SG+ ++ G GE
Sbjct: 488 PVFFCTIEPPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQTVLCGMGE 537
>AF367997-1|AAK53401.1| 779|Homo sapiens elongation factor G2
protein.
Length = 779
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGE 253
PV +EP + + P L LK L + DP ++ ++ +SG+ ++ G GE
Sbjct: 488 PVFFCTIEPPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQTVLCGMGE 537
>AF111808-1|AAL39010.1| 732|Homo sapiens MSTP027 protein.
Length = 732
Score = 32.3 bits (70), Expect = 1.2
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 107 PVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQC-INEESGEHIVVGAGE 253
PV +EP + + P L LK L + DP ++ ++ +SG+ ++ G GE
Sbjct: 441 PVFFCTIEPPSLSKQPDLEHALKCLQREDPSLKVRLDPDSGQTVLCGMGE 490
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,115,139
Number of Sequences: 237096
Number of extensions: 1102797
Number of successful extensions: 2073
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2066
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -