SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0519.Seq
         (548 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi...    42   5e-05
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M...    37   0.002
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF...    34   0.016
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo...    31   0.15 
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    30   0.20 
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb...    30   0.26 
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po...    29   0.45 
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa...    29   0.45 
SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|c...    29   0.45 
SPBC660.15 |||mRNA cleavage factor complex subunit |Schizosaccha...    29   0.60 
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ...    28   1.0  
SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces pomb...    28   1.0  
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo...    27   1.4  
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po...    27   1.4  
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa...    27   1.8  
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc...    27   1.8  
SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces p...    27   1.8  
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc...    27   1.8  
SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomy...    27   1.8  
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo...    27   1.8  
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom...    27   1.8  
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|...    27   1.8  
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce...    27   2.4  
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb...    27   2.4  
SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange facto...    26   3.2  
SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificit...    26   3.2  
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo...    26   3.2  
SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|c...    26   3.2  
SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc...    26   3.2  
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei...    26   3.2  
SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb...    26   3.2  
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ...    26   3.2  
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces...    26   4.2  
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|...    26   4.2  
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po...    26   4.2  
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ...    26   4.2  
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce...    26   4.2  
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ...    25   5.6  
SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyc...    25   5.6  
SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2 |Schizosacc...    25   5.6  
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz...    25   5.6  
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c...    25   5.6  
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr...    25   5.6  
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch...    25   5.6  
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr...    25   7.3  
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch...    25   7.3  
SPAC664.08c |||traub transciption factor family protein |Schizos...    25   7.3  
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p...    25   9.7  
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa...    25   9.7  
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy...    25   9.7  
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc...    25   9.7  
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom...    25   9.7  
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos...    25   9.7  

>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 451

 Score = 42.3 bits (95), Expect = 5e-05
 Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = -3

Query: 246 DGSKSGVTVEREKS-ESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 70
           D S S  + E E S E N  S    + E+ESS+    + S +S SE +SS KD +    +
Sbjct: 217 DSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSD----S 272

Query: 69  SSNKSFNDGDASAD 28
           SSN S ++ D+S+D
Sbjct: 273 SSNSSDSEDDSSSD 286



 Score = 35.5 bits (78), Expect = 0.005
 Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
 Frame = -3

Query: 258 DSKRDGSKSGVTVEREKSES----NKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 91
           +S  +GS S  +    +SES    N  S    + E+ESS+    + S +S SE +SS + 
Sbjct: 156 ESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEG 215

Query: 90  EEYSEQNSSNK---SFNDGDASA 31
            + S  +SS++   S  D D+S+
Sbjct: 216 SDSSSSSSSSESESSSEDNDSSS 238



 Score = 28.3 bits (60), Expect = 0.79
 Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = -3

Query: 264 NEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNS-GSERKSSGKDE 88
           +E S  D   +  + + + S S++      N +  +S       S NS  SE  +S KDE
Sbjct: 292 SESSSEDSDSTSSSSDSDSSSSSEDGNS--NTDTTTSGEVSAQSSTNSTSSEESTSVKDE 349

Query: 87  EYSEQNSSNKSFNDGDASADYQTKSKK 7
           + S+ +  +      D  +   TKS +
Sbjct: 350 DSSKIHDKSLKRKHEDDESSTSTKSSR 376


>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 500

 Score = 37.1 bits (82), Expect = 0.002
 Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
 Frame = -3

Query: 267 RNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSER--KSSGK 94
           + +  K++ S S    E   SES   S E E+  +ES +   ++ S  S  E   K+  K
Sbjct: 74  QKKSKKKEESSSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEK 133

Query: 93  DEEYSEQNSSNKSFNDGDASADYQTKSK 10
            E  SE +SS++S  + +A    + K +
Sbjct: 134 KESSSESSSSSESEEEEEAVVKIEEKKE 161



 Score = 36.3 bits (80), Expect = 0.003
 Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
 Frame = -3

Query: 228 VTVEREKSESNKKSREFENKEAES---STYRDKNRSVNSGSERKSSGKDEEYSE-QNSSN 61
           V +E +K  S+  S E  + E+ES   S+  ++   V   +E K  G  E  S+ ++SS+
Sbjct: 154 VKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSD 213

Query: 60  KSFNDGDASADYQTKSK 10
            S   GD+ +   ++S+
Sbjct: 214 SSSESGDSDSSSDSESE 230



 Score = 32.3 bits (70), Expect = 0.048
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
 Frame = -3

Query: 264 NEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSS--GKD 91
           +E S  +   S    E   SES   S E  + E+E            S SE  SS   ++
Sbjct: 89  SESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEE 148

Query: 90  EEYSEQNSSNKSFNDGDASADYQTKSKKVE 1
           EE +      K  +  D+S++  +   + E
Sbjct: 149 EEEAVVKIEEKKESSSDSSSESSSSESESE 178


>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
           eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 918

 Score = 33.9 bits (74), Expect = 0.016
 Identities = 18/90 (20%), Positives = 41/90 (45%)
 Frame = -3

Query: 270 IRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 91
           ++ +D      +S        SES     E E++E+E    + K  + +  SE  S   +
Sbjct: 30  LKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKKAVAASEDSESDSESSE 89

Query: 90  EEYSEQNSSNKSFNDGDASADYQTKSKKVE 1
           EE   ++  +   +D ++ ++ +++S+  E
Sbjct: 90  EEEETESEEDSEVSD-ESESESESESESEE 118



 Score = 27.5 bits (58), Expect = 1.4
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -3

Query: 207 SESNKKSREFENKE-AESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 52
           SES+++  E E++E +E S   +      S SE +S  ++E    + S   SF
Sbjct: 85  SESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSF 137



 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -3

Query: 174 NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVE 1
           + +AES    ++NR  +S  +++     EE S +  S  S     +  + +++  +VE
Sbjct: 11  DSDAESVDSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVE 68


>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 601

 Score = 30.7 bits (66), Expect = 0.15
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = -3

Query: 222 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDG 43
           +ER   + NKKSR    +E +    R+K  S    +E+ S  KD+    +N+ N  +ND 
Sbjct: 34  LERNNKQKNKKSRNQVRRE-KKKLLREKTNSGAKLAEKNSDDKDQ--LTENNDNL-YNDK 89

Query: 42  DASADYQTKSK 10
            ++ ++   +K
Sbjct: 90  KSNGNFYDTNK 100


>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 198

 Score = 30.3 bits (65), Expect = 0.20
 Identities = 17/67 (25%), Positives = 31/67 (46%)
 Frame = -3

Query: 219 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGD 40
           E E ++++ +   ++    E S   +    +    +++   K   +S + SSN S ND D
Sbjct: 127 ENEIADNDLEPEVYDILYEEESKLGESRDLIRRLKQKRFETKKNNFSVKESSNLSNNDSD 186

Query: 39  ASADYQT 19
           AS D  T
Sbjct: 187 ASLDEDT 193


>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 736

 Score = 29.9 bits (64), Expect = 0.26
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
 Frame = -3

Query: 255 SKRDGSKSGVTVEREKSESNKKSREFENKEAESSTY-----RDKNRSVNSGSERKSSGKD 91
           SKR  S  GV  ++EK +S   S      E ESS++     +D +  + S +   S  ++
Sbjct: 8   SKRANSNVGVEKDKEKEKSKGVSNVPNEVETESSSHEPSFKKDVDEEIPSLTAELSEEEE 67

Query: 90  EEYSEQNS------SNKSFNDGDASADYQ 22
            EYS ++       S   F D D   +++
Sbjct: 68  GEYSSESGRSTPELSPDDFEDADDEEEFE 96


>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 380

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 20/79 (25%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
 Frame = -3

Query: 273 IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESST-----YRDKNRSVNSGSER 109
           +IR   S+   S     VE+++S ++  S  ++ + + ++      Y D + S +S  E+
Sbjct: 239 LIRLTRSRARSSNEASYVEKDESSNSDDSISYKRRRSRNAANRITDYVDSDLSESSMKEK 298

Query: 108 KSSGKDEEYSEQNSSNKSF 52
           +S  K E+Y + + S+K+F
Sbjct: 299 QS--KIEKYMKSDKSSKNF 315


>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1628

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -3

Query: 249  RDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN 70
            R  + +   V RE+S         +NK  E +  +DKN+  +   E  +S ++   S   
Sbjct: 1484 RVSNNNSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQDISGE-SNSRQNNAISRAG 1542

Query: 69   SSNKSFNDGDASAD 28
             SN S N G+ S D
Sbjct: 1543 RSNGS-NRGNDSRD 1555


>SPBC19C7.10 |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 432

 Score = 29.1 bits (62), Expect = 0.45
 Identities = 19/67 (28%), Positives = 32/67 (47%)
 Frame = -3

Query: 261 EDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 82
           E+ K   S+   T +  KSE  KK  E + +E  SST +    S +    + S+ KD+  
Sbjct: 199 EEDKEIHSEENETKDEIKSE--KKEPEIKKQEGGSSTEKVGQPSSSDDKAKGSTSKDQPS 256

Query: 81  SEQNSSN 61
            E+  ++
Sbjct: 257 EEEEKTS 263


>SPBC660.15 |||mRNA cleavage factor complex subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 474

 Score = 28.7 bits (61), Expect = 0.60
 Identities = 17/80 (21%), Positives = 39/80 (48%)
 Frame = -3

Query: 297 IFRDRNQ*IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 118
           ++ + N+  + +    ++ S    T E E  E  +KS E   +  + + +R++      G
Sbjct: 15  LYGEENEKKVESASGNQETSNVTPTKENEGYEELEKSGEAGAERTKENPFREE-----PG 69

Query: 117 SERKSSGKDEEYSEQNSSNK 58
           ++   SG D++YS +  +N+
Sbjct: 70  ADFDRSGSDQQYSAEAEANQ 89


>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 599

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
 Frame = -3

Query: 264 NEDSKRDGSKSGVTVERE---KSE---------------SNKKSREFENKEAESSTYRDK 139
           NEDS  D S S V+ E+E   K E               S     E +  E+E+ T  + 
Sbjct: 308 NEDSVNDDSSSDVSDEKETEAKHEIRAPAIIVRETSSHPSTAVPSENDTTESENDTLSES 367

Query: 138 NRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSK 10
           + +  S S  ++S   ++ ++ +S NKS  + + SA +  +S+
Sbjct: 368 STTSISSSPSENSDTSDDLTKVDSPNKSLVNDNVSAKHDKESE 410


>SPAC688.14 |||lysine methyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 461

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
 Frame = -3

Query: 213 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQN--SSNKSFNDGD 40
           EK++S   S E E   AE+S   DKN      +E  ++  DE+   Q+   +N   N  D
Sbjct: 175 EKTKS-PISNENEKSAAETSIKEDKNGDAAKKNEGSANQDDEKLHSQSLVGNNCEVNSED 233

Query: 39  ASADYQTK 16
             +D +++
Sbjct: 234 EFSDLESE 241


>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
           Ino80|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1604

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
 Frame = -3

Query: 264 NEDSKRDGS----KSGVTVEREKSESNK---KSREFENKEAESSTYRDKNRSVNSGSERK 106
           NED K D S     S  T   + +E+N    K++     +  S    DK+R+  S    K
Sbjct: 440 NEDLKDDLSLADLSSKKTANSQATENNNTPSKAKVKAESKVRSKAKSDKSRAKLSSDTNK 499

Query: 105 SSGKDEEYSEQNSSNKSFNDGDASADYQ-TKSKK 7
            S K++       S    +DG++S +   TK+ K
Sbjct: 500 DSEKNDNNDASLQSAGVASDGESSPETPLTKASK 533


>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 381

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = -3

Query: 219 EREKSESNKKSREFEN---KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSF 52
           +R++     K RE+ +   K+  +  Y D      S S +K S + + Y+E+ + ++S+
Sbjct: 317 KRDRDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSYKKRSHRSDRYTERENPDRSY 375


>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 548

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
 Frame = -2

Query: 331 VTKIEERILTINIPRQEPINHQKRRQQA*WLE-ERRHSRKGK 209
           +T I ER+ ++ + +QE IN  K+R +A  LE E+ H+ +G+
Sbjct: 278 LTSIRERLESLILEKQEEINFWKQRCRA--LETEKIHNHQGQ 317


>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1085

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -3

Query: 252 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 94
           KR+  K    +ER+K E  +K +E E K  +     D+ +       R+   K
Sbjct: 647 KREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLREEEEK 699


>SPAC1952.02 |||ribosome biogenesis protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 202

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = -3

Query: 261 EDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 94
           E SKR+ SK     + +K +  KKS+  +  ++ +   + K R   S    KS  K
Sbjct: 137 ESSKREKSKKKKEKKEKKDKLKKKSKRLKLDDSHTQKRKRKVRDKESKKSSKSGLK 192


>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 745

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -3

Query: 270 IRNEDSKRDGSKSGVTVEREKSESNKKSREFENKE-AESSTYRDKNRSVNSGSERKSSGK 94
           + +++ KRD   +   + R K    +   EF   E +ESS    +  +  S  E      
Sbjct: 644 LSSDNFKRDFGDTNA-INRPKFVGQQTLEEFYASETSESSEGEYETSTSESEDEETDDTS 702

Query: 93  DEEYSEQNSSNKSFNDGDASADYQTKS 13
            EE +E+NS+     + + ++   TKS
Sbjct: 703 QEEDNEKNSTPDEDTENNNTSSISTKS 729


>SPCC285.11 |ucp10||UBA/UAS domain protein Ucp10|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 427

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -3

Query: 219 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSE 76
           ERE  E+ ++ R  ++   ++S  RD+ R   + +E +   K++E  E
Sbjct: 253 EREAREAARELRRQQDNAYQASLARDRERQAFARAEEERLAKEKEERE 300


>SPAC17C9.03 |tif471||translation initiation factor eIF4G
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1403

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 15/68 (22%), Positives = 29/68 (42%)
 Frame = -3

Query: 261 EDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEY 82
           E +KR+  ++      EK +   +       E E     DKN  + S +   SS  + + 
Sbjct: 671 EKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIKSSAPLASSEANVDT 730

Query: 81  SEQNSSNK 58
           S+Q ++ +
Sbjct: 731 SKQTNATE 738


>SPBC1A4.07c |||U3 snoRNP-associated protein
           Sof1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 436

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 13/34 (38%), Positives = 22/34 (64%)
 Frame = -2

Query: 289 RQEPINHQKRRQQA*WLEERRHSRKGKIRIQQEK 188
           ++E IN  KRR++      RRHS+KG +  ++E+
Sbjct: 398 KREEINSLKRREE----NIRRHSKKGAVPYEKER 427


>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 534

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -3

Query: 291 RDRNQ*IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKN-RSVNSG 118
           RDR      +  S+RD  +SG    RE S   +K    + +    S  RD   +S +SG
Sbjct: 16  RDRRSRFTEDSYSRRDSQRSGNEAPRE-SRYYRKEEHLQERSRSRSPARDSRWKSSSSG 73


>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 642

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 17/76 (22%), Positives = 30/76 (39%)
 Frame = -3

Query: 258 DSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYS 79
           D K+D S +    E         S   E + AES    D+  S    + ++S  + ++  
Sbjct: 58  DKKKDSSLNESEDEDFAGFGESASENDELESAESEAENDEESSSQKSNSKESHAQRKKLQ 117

Query: 78  EQNSSNKSFNDGDASA 31
           ++  + K F D    A
Sbjct: 118 KERKAMKPFADTSLKA 133


>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 508

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 20/82 (24%), Positives = 36/82 (43%)
 Frame = -3

Query: 273 IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGK 94
           + ++ +  ++  +  + +E++K    KKS + +  + ESS    K +       +KS  K
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKK----KKSSKLKEADGESSKKEKKEK--KDKKHKKSKRK 487

Query: 93  DEEYSEQNSSNKSFNDGDASAD 28
            EE SE   S K       S D
Sbjct: 488 SEE-SEDGESPKKKKKSKKSKD 508


>SPAC26F1.01 |sec74|SPAPJ691.01c|guanyl-nucleotide exchange factor
           Sec74|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 928

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = -3

Query: 261 EDSKRDGSKSGVTVEREKSESNKKSREF----ENKEAESSTYRDKNRSVNSGSERKSSGK 94
           ++S R  S S +    E   ++K S       + K A  S    KNR   S  +   +  
Sbjct: 2   DESSRIASSSALHGLDEMVSAHKPSPPLPSRRKGKSALRSALEKKNRKSKSKPKVTITSD 61

Query: 93  DEEYSEQNSSNKSFNDGDASADYQTKS 13
             + S Q+S   S   GD++ D  +KS
Sbjct: 62  TPKVSSQHSPVSSAYTGDSTTDLDSKS 88


>SPAC17G6.16c |ysh1||mRNA cleavage and polyadenylation specificity
           factor complex subunit Ysh1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 775

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 213 EKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKS 55
           E S+++    +FEN+E++     ++   +    + K+  K E   EQ S  K+
Sbjct: 714 EASQNDVSEDDFENEESDDDKIFEQQTKIE--DDVKNENKTEPVEEQKSEEKN 764


>SPAC4F10.09c |||ribosome biogenesis protein Noc1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 860

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = -3

Query: 240 SKSGVTVEREKSE--SNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQN 70
           SK  + ++ E+S+  S +  +   +  ++S    D+N + +  SE K    DEE  SE  
Sbjct: 733 SKPQLEMDEEESDFDSEEMDKAMTDMGSDSEQSADENDNESMASEEKPMFSDEENLSEIA 792

Query: 69  SSNKSFND 46
            S   F+D
Sbjct: 793 HSEDEFDD 800


>SPBC13G1.09 |||bystin-family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 449

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 273 IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVN-SGSERKSSG 97
           + R +  + D  ++G   +     SN   ++     A  S+Y +   + N S SE  +S 
Sbjct: 58  LAREQKEELDEEENGKPSQISAFISNGHQKDTLENPAIESSYEESEHARNVSDSESITSQ 117

Query: 96  KDEEYSE 76
           ++EEY E
Sbjct: 118 EEEEYEE 124


>SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 987

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 189 SREFENKEAESSTYRDKN--RSVNSGSERKSSGKD 91
           ++EFENK + ++T +D    R  N G+ R S   D
Sbjct: 520 TKEFENKFSNANTAKDDEPARQTNKGTTRISRSSD 554


>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
           Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 327

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/40 (25%), Positives = 24/40 (60%)
 Frame = -3

Query: 252 KRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNR 133
           +RD ++  + +E  +S+  ++ R+  N++  S T R+K +
Sbjct: 69  ERDSTQRTLQIESLESKIGEQERDLNNEKLASETLREKTQ 108


>SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 497

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = -3

Query: 207 SESNKKSREFENKEAESSTYRDKNRSVNSGSER--KSSGKDEEYSEQNSSNKSFNDGDAS 34
           +E+ +K+    N + +     D   +V + SE+  K   KD++  ++  S K  +  DAS
Sbjct: 425 AEAYEKALSSVNIDGDEEVDIDVEETVETISEKPSKKEKKDKKEKKKEKSKKKRSADDAS 484

Query: 33  ADYQTKSKK 7
            + +   KK
Sbjct: 485 EEVKKSKKK 493


>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 325

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -3

Query: 246 DGSKSGVTVE-REKSESNKKSREFE-NKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 73
           D  K   +VE R+K +S+ +  +   ++  + S+Y     S        S G++E+YS  
Sbjct: 77  DTKKGFNSVESRKKEQSDVRGGDTSYSRRHDDSSYSSNKYSTGGNDSYSSGGRNEDYSTS 136

Query: 72  NSS 64
             S
Sbjct: 137 GGS 139


>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1485

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
 Frame = -3

Query: 222  VEREKSESNKKSREFEN----KEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSS 64
            ++RE  E  + SR+F N    K    ST   K R++ +GS   ++ K E  SE   S
Sbjct: 1209 IQREMLEEEQSSRDFVNRTKKKPRGKSTGTRKPRAI-AGSSSSTAVKKEASSESKPS 1264


>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
            3|||Manual
          Length = 1184

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 219  EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE-YSEQNSS 64
            ER  S SN+K    E+     ST+ +          R+++  DE+ + EQ +S
Sbjct: 929  ERAHSYSNRKQASSESSPESQSTHYNDYEGTEDNIVRQTTTVDEDGHQEQTTS 981


>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 284

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 18/86 (20%), Positives = 38/86 (44%)
 Frame = -3

Query: 264 NEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEE 85
           +ED   + + S    +REK + +   ++ + K +  S    K        E+ +  K +E
Sbjct: 149 DEDRVCEDASSSDEAKREKRKKHSSKKKSKKKTSTGSALDPKK------LEKITKKKKKE 202

Query: 84  YSEQNSSNKSFNDGDASADYQTKSKK 7
           + +++  + S      S+D + K KK
Sbjct: 203 HKKKDKESSSKKRKSGSSDKEEKKKK 228


>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
           Its3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 742

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -3

Query: 159 SSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQT 19
           SS     +RS  S S++        YSE+NSSN     G  S D  T
Sbjct: 166 SSQQPPNDRSTLSSSQKAKRPLKRSYSEKNSSNAE-PSGSRSGDRGT 211


>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 389

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -3

Query: 222 VEREKSESNKKSREFENKEA-ESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 46
           V + K E  ++    E   A +    ++++ +V    E K   KD++     SSNK+ + 
Sbjct: 318 VHKSKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQKKEGITSSNKNDDS 377

Query: 45  GD 40
           G+
Sbjct: 378 GN 379


>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 266

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 12/58 (20%), Positives = 29/58 (50%)
 Frame = -3

Query: 219 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFND 46
           ++++    KK     +++   +   ++ RS +  S+ K    DE+  E  ++NK+ +D
Sbjct: 38  KKKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSD 95


>SPCC4F11.02 |ptc1||protein phosphatase 2C Ptc1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 347

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = -3

Query: 141 KNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKKVE 1
           K    N+GS  +   K   +SE ++S    N  D SAD +T+   +E
Sbjct: 2   KGSHPNAGSLLEPLHKLNPFSENSTSGHRKNASDHSADGETRPIAIE 48


>SPBC685.04c |aps2||AP-2 adaptor complex subunit Aps2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 143

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 278 WFLSRNIYRQYPFLYFC 328
           W  S+ +YR+Y  LYFC
Sbjct: 53  WENSKLVYRRYAGLYFC 69


>SPCC1919.03c |||AMP-activated protein kinase beta subunit
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 298

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 335 DSDKNRGKDTDDKYSETGTNKSSETKTASVMAR-RAASQSKGK 210
           D     G+ +DD   E G N++S+  T+      +  SQ+ GK
Sbjct: 46  DDLNQEGEMSDDNQQEGGNNRTSQNGTSGSSGHTKRRSQTSGK 88


>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 801

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -3

Query: 177 ENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFNDGDA 37
           E++E E S   +  R      + +   +DEE S+   S   F+DG+A
Sbjct: 373 EDEELEDSEDEEFARQQLLSRKEEEEEEDEEASDFEDSFADFSDGEA 419


>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 475

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = -3

Query: 147 RDKNRSVNSGSERKSSGKDE-EYSEQNSSNKSFN---DGDASADYQTKSKKVE 1
           R  +RS N GS R  +G+    YS   S+ +  N   + DAS    + +   E
Sbjct: 162 RKSSRSRNDGSRRNGNGRRRGNYSSHGSNKRQTNYSREKDASRSIDSSNPSAE 214


>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
            Mok12|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2352

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = +2

Query: 251  LLSSFLMIYWFLSRNIYRQY----PFLYF 325
            + S F + +WFLSR +  +Y    PF +F
Sbjct: 1976 IFSFFSLFWWFLSRVVQARYILSLPFFFF 2004


>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 568

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 23/97 (23%), Positives = 38/97 (39%)
 Frame = -3

Query: 297 IFRDRNQ*IIRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSG 118
           IF    + +    DS    +   ++   EK +    S     K A+S+   D     +S 
Sbjct: 168 IFFPNKEYLWTGSDSLTPLTSEAISQFLEKPKPKTASLIKAYKMAQSTPDLDSLSVPSSE 227

Query: 117 SERKSSGKDEEYSEQNSSNKSFNDGDASADYQTKSKK 7
           SE      D+E SE +   + +ND  A    +  +KK
Sbjct: 228 SEVSEEESDQEMSEPSPIEEDYNDTKARRITRKGTKK 264


>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 547

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = -3

Query: 219 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 58
           EREK ESN  S + E+  + ++T      S N+ S+ +    ++ Y  +  S K
Sbjct: 45  EREKVESNPNSSDEEDLTSTNNT----RSSDNTTSDTEDDSGEDSYQVEWESGK 94


>SPAC664.08c |||traub transciption factor family protein
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 452

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = -3

Query: 237 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 61
           K   T  +E   S   + +  +   E  +  D+N +V+   E  SS +    SE+N  +
Sbjct: 70  KGRKTSRQELLNSGSLNSQSSSPSEEEDSEEDENDAVSEDHENFSSSEASSISEENEDD 128


>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 192 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 61
           K  + +NK     +   KN + NS + RK++    EYS     N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245


>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
           element|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1333

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 192 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 61
           K  + +NK     +   KN + NS + RK++    EYS     N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245


>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -3

Query: 222 VEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNKSFN-D 46
           +E EK E+N  +    N+E E+++     +S    S  +   +  E  E+N+     N +
Sbjct: 437 LEDEKEENNTAAESLINQE-ETTSGEAVTKSTVESSANEEEAEPNEIIEENAVKSLLNQE 495

Query: 45  GDASADYQTKS 13
           G A+ +   K+
Sbjct: 496 GPATNEEVEKN 506


>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 192 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 61
           K  + +NK     +   KN + NS + RK++    EYS     N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245


>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 569

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
 Frame = -1

Query: 341 SDDSDKNRGKDTDDKYSETGTN----KSSETKTASVMARRAASQSK 216
           +D  +K   K+T+DK  ET +     K+ ET +  V  +   + SK
Sbjct: 469 NDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSK 514


>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
           element|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1333

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -3

Query: 192 KSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSN 61
           K  + +NK     +   KN + NS + RK++    EYS     N
Sbjct: 202 KRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIEYSSNKFLN 245


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,509,877
Number of Sequences: 5004
Number of extensions: 24991
Number of successful extensions: 225
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 220
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -