Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0519.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    31   0.025
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   1.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   1.2  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.8  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   5.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.8  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 31.1 bits (67), Expect = 0.025
 Identities = 13/66 (19%), Positives = 30/66 (45%)
 Frame = -3

Query: 270 IRNEDSKRDGSKSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKD 91
           +R E+  R+  ++ +  E+E+    ++ RE   KE      R+K        E++   ++
Sbjct: 452 LREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQREKEQRERE 511

Query: 90  EEYSEQ 73
           +   E+
Sbjct: 512 QREKER 517



 Score = 27.9 bits (59), Expect = 0.23
 Identities = 13/49 (26%), Positives = 23/49 (46%)
 Frame = -3

Query: 219 EREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQ 73
           E+E+ E  ++ R+   KE      R+K R   +  ER+   + E   E+
Sbjct: 489 EKEQREKEERERQQREKEQREREQREKEREREAARERERERERERERER 537


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -3

Query: 237 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 58
           K    VER  + + +    F+ K+   +  RD+ R          S   ++ S  +SS+ 
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467

Query: 57  S 55
           S
Sbjct: 468 S 468


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/61 (22%), Positives = 25/61 (40%)
 Frame = -3

Query: 237 KSGVTVEREKSESNKKSREFENKEAESSTYRDKNRSVNSGSERKSSGKDEEYSEQNSSNK 58
           K    VER  + + +    F+ K+   +  RD+ R          S   ++ S  +SS+ 
Sbjct: 408 KQAKEVERRGNRNRRDLNAFKEKQYYEAYKRDQYRLRKQNDTSSDSSSSDDSSSSSSSSS 467

Query: 57  S 55
           S
Sbjct: 468 S 468


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 192 KSREFENKEAESSTYRDKNRSVNSGSER 109
           K  +   +  E STYRDK+ S ++  E+
Sbjct: 699 KDADGNGEGTEESTYRDKDESFDTPEEQ 726


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 80  VNRTPVINPLTTAMHRLTTKP 18
           VN T  + P    +HR+TT+P
Sbjct: 360 VNETLRLYPPVATLHRITTQP 380


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 69  SSVHCTPRLYRNSCVPSHCSLTDSYP 146
           SS HCT +  + SC  +   LT   P
Sbjct: 40  SSAHCTQQTRQASCSDNAAQLTYRLP 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 369,452
Number of Sequences: 2352
Number of extensions: 5950
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)