Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0518.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    26   0.80 
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    24   4.3  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    23   9.9  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    23   9.9  

>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 26.2 bits (55), Expect = 0.80
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -2

Query: 81  LFSTTHVPHHVKADAQVRQQLNMSHST 1
           LFS+ H+P+H+ AD Q    L+   ST
Sbjct: 333 LFSSKHLPYHLDADEQQIPTLSEMVST 359


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 397 TLRKRDHDVCSAHRRXHP 450
           T+ +  H+ CS+H R HP
Sbjct: 385 TVGQWKHEGCSSHERLHP 402


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +3

Query: 186 QSFPLSRFLXNVVGLA 233
           QS  +SR+L N VGLA
Sbjct: 55  QSVAMSRYLANQVGLA 70


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 434 CAEQTSWSRFR 402
           CAE+ SW RFR
Sbjct: 518 CAEKGSWIRFR 528


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,049
Number of Sequences: 2352
Number of extensions: 11649
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)