Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0518.Seq
(598 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor ... 163 3e-40
X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein. 163 3e-40
M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein. 163 3e-40
BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein. 163 3e-40
BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation f... 163 3e-40
AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2 pro... 163 3e-40
D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein. 95 2e-19
CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein. 95 2e-19
BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GT... 95 2e-19
AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear ribonucle... 95 2e-19
AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens ... 82 2e-15
BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor, mi... 43 0.001
AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1 pr... 43 0.001
AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G pro... 43 0.001
AY093673-1|AAM44451.1| 169|Homo sapiens p53-activated protein-2... 36 0.14
>Z11692-1|CAA77750.1| 858|Homo sapiens human elongation factor 2
protein.
Length = 858
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILP 821
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 712 DAIHRGGGQIIPTARRCLYASVLTAQP 738
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>X51466-1|CAA35829.1| 858|Homo sapiens elongation factor 2 protein.
Length = 858
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILP 821
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 712 DAIHRGGGQIIPTARRCLYASVLTAQP 738
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>M19997-1|AAA50388.1| 358|Homo sapiens elongation factor 2 protein.
Length = 358
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 237 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 296
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 297 TADLRSNTGGQAFPQCVFDHWQILP 321
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 212 DAIHRGGGQIIPTARRCLYASVLTAQP 238
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 321 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 349
>BC126259-1|AAI26260.1| 858|Homo sapiens EEF2 protein protein.
Length = 858
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILP 821
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 712 DAIHRGGGQIIPTARRCLYASVLTAQP 738
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>BC024689-1|AAH24689.1| 517|Homo sapiens Similar to Elongation
factor 2b protein.
Length = 517
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 396 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 455
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 456 TADLRSNTGGQAFPQCVFDHWQILP 480
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 371 DAIHRGGGQIIPTARRCLYASVLTAQP 397
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 480 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 508
>AY942181-1|AAX34409.1| 858|Homo sapiens elongation factor 2
protein.
Length = 858
Score = 163 bits (397), Expect = 3e-40
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -1
Query: 508 QPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGF 329
QPRLMEP+YL EIQCPE VGGI GVLNR+RGHVFEESQVAGTPMF+VKA LP NESFGF
Sbjct: 737 QPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGF 796
Query: 328 TADLRSNTGGQAFPQCVFDHXQVXP 254
TADLRSNTGGQAFPQCVFDH Q+ P
Sbjct: 797 TADLRSNTGGQAFPQCVFDHWQILP 821
Score = 53.6 bits (123), Expect = 5e-07
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +LTA P
Sbjct: 712 DAIHRGGGQIIPTARRCLYASVLTAQP 738
Score = 45.6 bits (103), Expect = 1e-04
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP + S+P V ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849
>D21163-1|BAA04699.2| 977|Homo sapiens KIAA0031 protein.
Length = 977
Score = 94.7 bits (225), Expect = 2e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP Y E+Q P V + VL RRRGHV +++ + G+P++ +KA +P +SFGF
Sbjct: 830 PRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFE 889
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 890 TDLRTHTQGQAFSLSVFHHWQIVP 913
Score = 44.0 bits (99), Expect = 4e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+ +HRGGGQIIPT RR +Y+ L A+P Y FV+
Sbjct: 804 EPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVE 840
>CR456774-1|CAG33055.1| 972|Homo sapiens U5-116KD protein.
Length = 972
Score = 94.7 bits (225), Expect = 2e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP Y E+Q P V + VL RRRGHV +++ + G+P++ +KA +P +SFGF
Sbjct: 825 PRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFE 884
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 885 TDLRTHTQGQAFSLSVFHHWQIVP 908
Score = 44.0 bits (99), Expect = 4e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+ +HRGGGQIIPT RR +Y+ L A+P Y FV+
Sbjct: 799 EPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVE 835
>BC002360-1|AAH02360.1| 972|Homo sapiens elongation factor Tu GTP
binding domain containing 2 protein.
Length = 972
Score = 94.7 bits (225), Expect = 2e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP Y E+Q P V + VL RRRGHV +++ + G+P++ +KA +P +SFGF
Sbjct: 825 PRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFE 884
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 885 TDLRTHTQGQAFSLSVFHHWQIVP 908
Score = 44.0 bits (99), Expect = 4e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+ +HRGGGQIIPT RR +Y+ L A+P Y FV+
Sbjct: 799 EPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVE 835
>AJ505017-1|CAD43720.1| 850|Homo sapiens small nuclear
ribonucleoprotein component protein.
Length = 850
Score = 94.7 bits (225), Expect = 2e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP Y E+Q P V + VL RRRGHV +++ + G+P++ +KA +P +SFGF
Sbjct: 703 PRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFE 762
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 763 TDLRTHTQGQAFSLSVFHHWQIVP 786
Score = 43.6 bits (98), Expect = 5e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -2
Query: 576 IHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+HRGGGQIIPT RR +Y+ L A+P Y FV+
Sbjct: 679 LHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVE 713
>AK023181-1|BAB14450.1| 857|Homo sapiens protein ( Homo sapiens
cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
ELONGATION FACTOR 2. ).
Length = 857
Score = 81.8 bits (193), Expect = 2e-15
Identities = 37/83 (44%), Positives = 49/83 (59%)
Frame = -1
Query: 502 RLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFTA 323
RLM +Y C+I +G + VL++R G V +E GT MFI+KA LP ESFGF
Sbjct: 716 RLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFAD 775
Query: 322 DLRSNTGGQAFPQCVFDHXQVXP 254
++R T G A PQ VF H ++ P
Sbjct: 776 EIRKRTSGLASPQLVFSHWEIIP 798
>BC049210-1|AAH49210.1| 751|Homo sapiens G elongation factor,
mitochondrial 1 protein.
Length = 751
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -1
Query: 517 ANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNES 338
AN ++EP+ E+ P G + +NRR G + + V F + A +P N+
Sbjct: 639 ANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDM 696
Query: 337 FGFTADLRSNTGGQ 296
FG++ +LRS T G+
Sbjct: 697 FGYSTELRSCTEGK 710
>AF367998-1|AAK53402.1| 751|Homo sapiens elongation factor G1
protein.
Length = 751
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -1
Query: 517 ANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNES 338
AN ++EP+ E+ P G + +NRR G + + V F + A +P N+
Sbjct: 639 ANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDM 696
Query: 337 FGFTADLRSNTGGQ 296
FG++ +LRS T G+
Sbjct: 697 FGYSTELRSCTEGK 710
>AF309777-1|AAK58877.1| 751|Homo sapiens elongation factor G
protein.
Length = 751
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/74 (31%), Positives = 38/74 (51%)
Frame = -1
Query: 517 ANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNES 338
AN ++EP+ E+ P G + +NRR G + + V F + A +P N+
Sbjct: 639 ANATLCILEPIMAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDM 696
Query: 337 FGFTADLRSNTGGQ 296
FG++ +LRS T G+
Sbjct: 697 FGYSTELRSCTEGK 710
>AY093673-1|AAM44451.1| 169|Homo sapiens p53-activated protein-2
protein.
Length = 169
Score = 35.5 bits (78), Expect = 0.14
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = -3
Query: 323 RFAFQHRRTGLPAVRIRPXAGPPGDPCEPQSKPXNVXQETRKR 195
R Q R+TG R++P A PPG P P P N ++TR R
Sbjct: 65 RLRSQPRQTGRQPPRVQPLAPPPGAPA-PLPNPQNCRRKTRSR 106
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,292,872
Number of Sequences: 237096
Number of extensions: 1691979
Number of successful extensions: 3491
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3488
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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