Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0518.Seq
(598 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15805-1|CAA33804.1| 844|Drosophila melanogaster protein ( Dros... 170 1e-42
AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p pro... 170 1e-42
AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC... 170 1e-42
AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB... 170 1e-42
AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA... 170 1e-42
AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p pro... 91 8e-19
AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA... 91 8e-19
AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p pro... 61 1e-09
AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-P... 61 1e-09
AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA... 50 3e-06
AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-P... 36 0.042
AY113647-1|AAM29652.1| 1081|Drosophila melanogaster SD10773p pro... 29 3.6
AE014297-1482|AAF54780.1| 1081|Drosophila melanogaster CG10042-P... 29 3.6
AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P... 29 3.6
BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p pro... 29 6.3
AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-P... 29 6.3
>X15805-1|CAA33804.1| 844|Drosophila melanogaster protein (
Drosophila DMEF2 genefor the translation elongation
factor 2. ).
Length = 844
Score = 170 bits (414), Expect = 1e-42
Identities = 77/95 (81%), Positives = 82/95 (86%)
Frame = -1
Query: 538 KMLVCMSANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKA 359
+ L + +PRLMEPVYLCEIQCPEVAVGGI GVLNRRRGHVFEE+QV GTPMF+VKA
Sbjct: 713 RCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKA 772
Query: 358 XLPXNESFGFTADLRSNTGGQAFPQCVFDHXQVXP 254
LP NESFGFTADLRSNTGGQAFPQCVFDH QV P
Sbjct: 773 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 807
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP EP SKP + Q+TRKRKGLKEGLP
Sbjct: 807 PGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +TA P
Sbjct: 698 DAIHRGGGQIIPTTRRCLYAAAITAKP 724
>AY075481-1|AAL68292.1| 844|Drosophila melanogaster RE38659p
protein.
Length = 844
Score = 170 bits (414), Expect = 1e-42
Identities = 77/95 (81%), Positives = 82/95 (86%)
Frame = -1
Query: 538 KMLVCMSANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKA 359
+ L + +PRLMEPVYLCEIQCPEVAVGGI GVLNRRRGHVFEE+QV GTPMF+VKA
Sbjct: 713 RCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKA 772
Query: 358 XLPXNESFGFTADLRSNTGGQAFPQCVFDHXQVXP 254
LP NESFGFTADLRSNTGGQAFPQCVFDH QV P
Sbjct: 773 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 807
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP EP SKP + Q+TRKRKGLKEGLP
Sbjct: 807 PGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +TA P
Sbjct: 698 DAIHRGGGQIIPTTRRCLYAAAITAKP 724
>AE014134-3534|AAN11135.1| 832|Drosophila melanogaster CG2238-PC,
isoform C protein.
Length = 832
Score = 170 bits (414), Expect = 1e-42
Identities = 77/95 (81%), Positives = 82/95 (86%)
Frame = -1
Query: 538 KMLVCMSANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKA 359
+ L + +PRLMEPVYLCEIQCPEVAVGGI GVLNRRRGHVFEE+QV GTPMF+VKA
Sbjct: 701 RCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKA 760
Query: 358 XLPXNESFGFTADLRSNTGGQAFPQCVFDHXQVXP 254
LP NESFGFTADLRSNTGGQAFPQCVFDH QV P
Sbjct: 761 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 795
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP EP SKP + Q+TRKRKGLKEGLP
Sbjct: 795 PGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +TA P
Sbjct: 686 DAIHRGGGQIIPTTRRCLYAAAITAKP 712
>AE014134-3533|AAG22125.2| 832|Drosophila melanogaster CG2238-PB,
isoform B protein.
Length = 832
Score = 170 bits (414), Expect = 1e-42
Identities = 77/95 (81%), Positives = 82/95 (86%)
Frame = -1
Query: 538 KMLVCMSANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKA 359
+ L + +PRLMEPVYLCEIQCPEVAVGGI GVLNRRRGHVFEE+QV GTPMF+VKA
Sbjct: 701 RCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKA 760
Query: 358 XLPXNESFGFTADLRSNTGGQAFPQCVFDHXQVXP 254
LP NESFGFTADLRSNTGGQAFPQCVFDH QV P
Sbjct: 761 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 795
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP EP SKP + Q+TRKRKGLKEGLP
Sbjct: 795 PGDPSEPSSKPYAIVQDTRKRKGLKEGLP 823
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +TA P
Sbjct: 686 DAIHRGGGQIIPTTRRCLYAAAITAKP 712
>AE014134-3532|AAF57226.2| 844|Drosophila melanogaster CG2238-PA,
isoform A protein.
Length = 844
Score = 170 bits (414), Expect = 1e-42
Identities = 77/95 (81%), Positives = 82/95 (86%)
Frame = -1
Query: 538 KMLVCMSANCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKA 359
+ L + +PRLMEPVYLCEIQCPEVAVGGI GVLNRRRGHVFEE+QV GTPMF+VKA
Sbjct: 713 RCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVKA 772
Query: 358 XLPXNESFGFTADLRSNTGGQAFPQCVFDHXQVXP 254
LP NESFGFTADLRSNTGGQAFPQCVFDH QV P
Sbjct: 773 YLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLP 807
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = -3
Query: 257 PGDPCEPQSKPXNVXQETRKRKGLKEGLP 171
PGDP EP SKP + Q+TRKRKGLKEGLP
Sbjct: 807 PGDPSEPSSKPYAIVQDTRKRKGLKEGLP 835
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASP 502
DAIHRGGGQIIPT RRCLYA +TA P
Sbjct: 698 DAIHRGGGQIIPTTRRCLYAAAITAKP 724
>AY089551-1|AAL90289.1| 975|Drosophila melanogaster LD28793p protein.
Length = 975
Score = 91.5 bits (217), Expect = 8e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP E+Q P V + VL RRRGHV +++ V+G+P++ +KA +P +SFGF
Sbjct: 828 PRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFE 887
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 888 TDLRTHTQGQAFCLSVFHHWQIVP 911
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+A+HRGGGQIIPT RR Y+ L A+P Y+FV+
Sbjct: 802 EALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVE 838
>AE014297-4212|AAF56769.1| 975|Drosophila melanogaster CG4849-PA
protein.
Length = 975
Score = 91.5 bits (217), Expect = 8e-19
Identities = 41/84 (48%), Positives = 56/84 (66%)
Frame = -1
Query: 505 PRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFT 326
PRLMEP E+Q P V + VL RRRGHV +++ V+G+P++ +KA +P +SFGF
Sbjct: 828 PRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFE 887
Query: 325 ADLRSNTGGQAFPQCVFDHXQVXP 254
DLR++T GQAF VF H Q+ P
Sbjct: 888 TDLRTHTQGQAFCLSVFHHWQIVP 911
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2
Query: 582 DAIHRGGGQIIPTXRRCLYACLLTASPVSWSLYIFVK 472
+A+HRGGGQIIPT RR Y+ L A+P Y+FV+
Sbjct: 802 EALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVE 838
>AY058769-1|AAL13998.1| 949|Drosophila melanogaster SD04694p protein.
Length = 949
Score = 61.3 bits (142), Expect = 1e-09
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 529 VCMSA--NCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAX 356
VC A N RL+ P+Y C I +G + V+ RR G + G+ F V
Sbjct: 797 VCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCL 856
Query: 355 LPXNESFGFTADLRSNTGGQAFPQCVFDHXQV 260
LP ESF F ++R T G A PQ +F H +V
Sbjct: 857 LPVIESFNFAQEMRKQTSGLACPQLMFSHWEV 888
>AE014296-2740|AAF49461.3| 1033|Drosophila melanogaster CG33158-PB
protein.
Length = 1033
Score = 61.3 bits (142), Expect = 1e-09
Identities = 33/92 (35%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = -1
Query: 529 VCMSA--NCQPRLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAX 356
VC A N RL+ P+Y C I +G + V+ RR G + G+ F V
Sbjct: 881 VCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCL 940
Query: 355 LPXNESFGFTADLRSNTGGQAFPQCVFDHXQV 260
LP ESF F ++R T G A PQ +F H +V
Sbjct: 941 LPVIESFNFAQEMRKQTSGLACPQLMFSHWEV 972
>AE014134-1251|AAF52495.2| 745|Drosophila melanogaster CG4567-PA
protein.
Length = 745
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = -1
Query: 502 RLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFTA 323
+++EP+ L E+ PE G + G L++R G + G F V A +P N+ FG+
Sbjct: 638 QILEPIMLVEVTAPEEFQGAVMGHLSKRHGIITGTEGTEG--WFTVYAEVPLNDMFGYAG 695
Query: 322 DLRSNTGGQ 296
+LRS+T G+
Sbjct: 696 ELRSSTQGK 704
>AE014297-3196|AAF56031.2| 692|Drosophila melanogaster CG31159-PA
protein.
Length = 692
Score = 35.9 bits (79), Expect = 0.042
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = -1
Query: 502 RLMEPVYLCEIQCPEVAVGGIXGVLNRRRGHVFEESQVAGTPMFIVKAXLPXNESFGFTA 323
RL+EP+ +I P + GI L+RRR + + G ++ P E G+++
Sbjct: 596 RLLEPIMALQIVAPSERISGIMADLSRRRA-LINDVLPKGERNKMILVNAPLAELSGYSS 654
Query: 322 DLR---SNTGGQAFPQCVFDHXQVXPETRANLRA 230
LR S T C F E+ A RA
Sbjct: 655 ALRTISSGTASMTMQPCGFSSMNSVDESLAERRA 688
>AY113647-1|AAM29652.1| 1081|Drosophila melanogaster SD10773p
protein.
Length = 1081
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 309 TPADRPSRSAYSTXGRSXRRPVRTSEQAXQRXTGNEKEE 193
+P+ RPS S S RS RRP+ + A T + EE
Sbjct: 704 SPSKRPSGSRKSNRQRSQRRPILSDNPAGHGLTEQDVEE 742
>AE014297-1482|AAF54780.1| 1081|Drosophila melanogaster CG10042-PA,
isoform A protein.
Length = 1081
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 309 TPADRPSRSAYSTXGRSXRRPVRTSEQAXQRXTGNEKEE 193
+P+ RPS S S RS RRP+ + A T + EE
Sbjct: 704 SPSKRPSGSRKSNRQRSQRRPILSDNPAGHGLTEQDVEE 742
>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
isoform B protein.
Length = 1169
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -2
Query: 309 TPADRPSRSAYSTXGRSXRRPVRTSEQAXQRXTGNEKEE 193
+P+ RPS S S RS RRP+ + A T + EE
Sbjct: 792 SPSKRPSGSRKSNRQRSQRRPILSDNPAGHGLTEQDVEE 830
>BT025849-1|ABF85749.1| 407|Drosophila melanogaster IP14878p
protein.
Length = 407
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 93 LHACLFSTTHVPHHVKADAQVRQQLNMSHST 1
LHA + PHH++ DA++R+ N++ ST
Sbjct: 212 LHASINLPAAGPHHLRQDARLRKFENLTQST 242
>AE014298-3188|AAN09569.1| 1751|Drosophila melanogaster CG14616-PC,
isoform C protein.
Length = 1751
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 93 LHACLFSTTHVPHHVKADAQVRQQLNMSHST 1
LHA + PHH++ DA++R+ N++ ST
Sbjct: 1556 LHASINLPAAGPHHLRQDARLRKFENLTQST 1586
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,498,793
Number of Sequences: 53049
Number of extensions: 499054
Number of successful extensions: 1218
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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