Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0517.Seq
(449 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 114 1e-24
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 107 8e-23
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 98 9e-20
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 97 2e-19
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 94 1e-18
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 92 6e-18
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 66 3e-10
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 66 4e-10
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 52 9e-10
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 64 1e-09
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 62 4e-09
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 62 7e-09
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 60 2e-08
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 58 7e-08
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 53 3e-06
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 52 6e-06
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 44 0.001
UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia j... 36 0.41
UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8; Ricketts... 34 1.2
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n... 33 2.2
UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8; n... 33 3.8
UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole gen... 32 5.0
UniRef50_A5KZR4 Cluster: Negative regulator of beta-lactamase ex... 31 8.8
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 114 bits (274), Expect = 1e-24
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 7e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 107 bits (258), Expect = 8e-23
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV LTVMMKHGY GEFEI+DDHR G
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVWFLTVMMKHGYTGEFEIIDDHRDG 182
Score = 92.3 bits (219), Expect = 4e-18
Identities = 41/60 (68%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVIS RFDV + D+++W NLLP RQFG++VLTT GI+ HEEAR KH GGKILGFFF
Sbjct: 194 KCGVISLRFDVQLKDLDKWQNNLLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 97.9 bits (233), Expect = 9e-20
Identities = 46/59 (77%), Positives = 53/59 (89%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVR NVL+DALK I+NA+KRGK QVL+RPCS+VI++ LTV MKHGYIGEFEI DDHRAG
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRPCSEVIIRFLTV-MKHGYIGEFEITDDHRAG 58
Score = 89.8 bits (213), Expect = 2e-17
Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRF V + D+E+W NLLPS QFG+++LTT GI EEAR KH GGKILGFFF
Sbjct: 70 KCGVISPRFHVQLKDLEKWQNNLLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 97.1 bits (231), Expect = 2e-19
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVR++VL+D LKS++NAEKRGK QV+IRP SKVI+K L VM KHGYIGEFE VDDHR+G
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSG 59
Score = 95.1 bits (226), Expect = 6e-19
Identities = 42/60 (70%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWT-NLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + +IE WT LLPSRQFG++VLTT GIM HEEAR K++GGK+LGFF+
Sbjct: 71 KCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 94.3 bits (224), Expect = 1e-18
Identities = 44/52 (84%), Positives = 48/52 (92%)
Frame = +1
Query: 64 SDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
SDALKSI+NAEKRGK QVLIR CSKVIV+ L+VMMKHGYIGEFEI+DDH AG
Sbjct: 174 SDALKSINNAEKRGKRQVLIRLCSKVIVRFLSVMMKHGYIGEFEIIDDHTAG 225
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/54 (61%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGK 410
+CGVI+ RFDV D+E+W NL PS QFG++VLTT GIM HEEAR KH G +
Sbjct: 237 KCGVINTRFDVQPKDLEKWRNNLFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 91.9 bits (218), Expect = 6e-18
Identities = 44/61 (72%), Positives = 49/61 (80%)
Frame = +1
Query: 37 LAMVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRA 216
+ MV MNVL DALKS ++AEK GK Q IR CSK IV+ LTVMMKHGYI EFEI+DDHRA
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIRLCSKAIVRFLTVMMKHGYISEFEIIDDHRA 156
Query: 217 G 219
G
Sbjct: 157 G 157
Score = 91.5 bits (217), Expect = 8e-18
Identities = 40/59 (67%), Positives = 48/59 (81%), Gaps = 1/59 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFF 425
+CGVISPRFDV + D+E+W NLLP+RQFG++VLTT GIM EE R KH GG+ILGFF
Sbjct: 169 KCGVISPRFDVQLKDLEKWQNNLLPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 66.5 bits (155), Expect = 3e-10
Identities = 31/59 (52%), Positives = 43/59 (72%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
M ++ L++AL I N+E+ GK +V I+P SK+I + L VM K+GYIGEFE +DD RAG
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAG 59
Score = 56.8 bits (131), Expect = 2e-07
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+ G I PRF V +++ E+W LP+ +FG L+++T G+M H+EA K +GG+++ + +
Sbjct: 71 KAGAIKPRFPVKVSEFEKWEKRFLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 65.7 bits (153), Expect = 4e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
M +N L++AL +++N E R Q LI P SK+I+ L VM K GYIGEFE +DD RAG
Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAG 59
Score = 45.6 bits (103), Expect = 5e-04
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTNL----LPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILG 419
+CG ISPR+ + N + R + LPS++ G ++++T G+M H + + +GG LG
Sbjct: 71 KCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLG 130
Query: 420 FFF 428
+ +
Sbjct: 131 YVY 133
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 52.0 bits (119), Expect(2) = 9e-10
Identities = 23/46 (50%), Positives = 33/46 (71%)
Frame = +1
Query: 37 LAMVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKH 174
++ V + + +S++NAEKRGK QVL+RP SKV++K L VM KH
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRPVSKVVIKFLQVMQKH 76
Score = 32.7 bits (71), Expect(2) = 9e-10
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +1
Query: 175 GYIGEFEIVDDHRAG 219
GYI EFE +DDHRAG
Sbjct: 107 GYINEFEFIDDHRAG 121
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 64.1 bits (149), Expect = 1e-09
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
C ++ R DV +IE++T LP+RQ+GY+V+TT GI+ HEEA +++GG++LGFF+
Sbjct: 71 CKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
Score = 57.6 bits (133), Expect = 1e-07
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 58 VLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
+L+DAL++I NAE+RGK V ++P S V+ L +M + GYI F++ D HR G
Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVG 58
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 62.5 bits (145), Expect = 4e-09
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CG ISP + V + IE + T LLP+RQFG+++ T GI+ H+E +++GGKILG+F+
Sbjct: 69 RCGAISPNYIVKRDGIEDFRTRLLPARQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
Score = 44.8 bits (101), Expect = 9e-04
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +1
Query: 61 LSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
L++ K+I+NA + GK Q+L+R ++ + L M++HGYI F + D R+G
Sbjct: 5 LANMCKAINNASRAGKRQLLLRFSTEEMRMFLLQMLRHGYISGFSYIHDKRSG 57
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 61.7 bits (143), Expect = 7e-09
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CG I PR+ V ERW LP++ FG L+LTT G+M EAR K +GG++L + +
Sbjct: 71 KCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
Score = 59.7 bits (138), Expect = 3e-08
Identities = 29/59 (49%), Positives = 39/59 (66%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MV ++ L++AL +I NAE GK ++RP SK I L VM GYIG+FE +DD +AG
Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAG 59
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 60.5 bits (140), Expect = 2e-08
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 CGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
CGVI PR V ++IER+ + LP++ FG ++LTT GIM H EAR +GGK+L + +
Sbjct: 71 CGVIKPRLSVKNSNIERYESRYLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 58.4 bits (135), Expect = 7e-08
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CG + PR+ ++ E+W LP+R +G L++TT G+M H EAR + +GG+++ + +
Sbjct: 88 ECGAVKPRYSAGADEFEKWEKRYLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
Score = 44.0 bits (99), Expect = 0.002
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +1
Query: 37 LAMVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRA 216
L M + ++AL + NAE G + P S +I L V+ GY+ FE VDD +A
Sbjct: 16 LIMTGNDPFTNALAGMDNAESVGHLSYTVEPASNIIGSVLEVLYDRGYVDGFEYVDDGKA 75
Query: 217 G 219
G
Sbjct: 76 G 76
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 52.8 bits (121), Expect = 3e-06
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CG ISPRF V + W LPS G LV+TT G+M H EA + +GG ++G+ +
Sbjct: 71 KCGAISPRFKVKKGEYTFWEQQYLPSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
Score = 48.4 bits (110), Expect = 7e-05
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
M N+L++ +++N E R + + P SK+ V+ L + K GYIGEFE V+D R G
Sbjct: 1 MPATNILANLFVTLYNTEARRRGDCQVYPTSKLGVEVLGTLKKAGYIGEFEHVEDSRGG 59
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 52.0 bits (119), Expect = 6e-06
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 255 CGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
CG I PRF + + E + LP+R FG L+++T G+M ++AR + LGG +L + +
Sbjct: 71 CGAIRPRFSSSVTEYEMYEKRYLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
Score = 50.8 bits (116), Expect = 1e-05
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1
Query: 52 MNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
++ LS+A+ +I NAE G+ + I+P SK+I L VM +GYI FE V++HR G
Sbjct: 3 VDTLSNAMIAIKNAEMVGEKKCEIKPASKLIGNVLKVMKDYGYIKGFEYVENHRGG 58
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 44.4 bits (100), Expect = 0.001
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERWTN-LLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+ I PRF V +++E++ LP+ FG L+L+T G++ + EA+ + +GG ++ + +
Sbjct: 70 EANAIKPRFPVEYSELEKYEKRYLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
Score = 40.7 bits (91), Expect = 0.014
Identities = 15/53 (28%), Positives = 31/53 (58%)
Frame = +1
Query: 55 NVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHR 213
++++D L + N ++G+ + P S +I+K + +M + GYI + +VD R
Sbjct: 4 DIVADFLSHLTNVRRKGEDKTAFFPVSNLIIKLVEIMKREGYIKNYRLVDSSR 56
>UniRef50_Q7XYA5 Cluster: Ribosome protein S8; n=1; Griffithsia
japonica|Rep: Ribosome protein S8 - Griffithsia japonica
(Red alga)
Length = 142
Score = 35.9 bits (79), Expect = 0.41
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 273 RFDVPINDIERWTNLLPSRQ--FGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
R VP + + R LP + G +L+T G+M EAR K LGG+++G F
Sbjct: 89 RVSVPSHRVYRKITQLPLARAGLGTWILSTPNGVMHCTEARQKRLGGEVIGEVF 142
>UniRef50_Q2GL45 Cluster: 30S ribosomal protein S8; n=8;
Rickettsiales|Rep: 30S ribosomal protein S8 - Anaplasma
phagocytophilum (strain HZ)
Length = 133
Score = 34.3 bits (75), Expect = 1.2
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +1
Query: 61 LSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEF 192
++D L + N + G +V+ PCSKV++ L ++++ GYI F
Sbjct: 7 IADFLTRLRNGQA-GMNKVVYVPCSKVVMAVLRILVEEGYIESF 49
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.5 bits (73), Expect = 2.2
Identities = 18/39 (46%), Positives = 20/39 (51%)
Frame = -2
Query: 118 GLVXSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 2
G + SLA Y H SY W RFSS FV+N ID
Sbjct: 347 GKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_Q06SG0 Cluster: Chloroplast 30S ribosomal protein S8; n=1;
Stigeoclonium helveticum|Rep: Chloroplast 30S ribosomal
protein S8 - Stigeoclonium helveticum (Green alga)
Length = 176
Score = 33.5 bits (73), Expect = 2.2
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 55 NVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEI 198
+ +SD L I NA K VLI P +K+ +K ++ K GYI FEI
Sbjct: 4 DTISDMLTRIRNASIVRKKSVLI-PYTKMNLKIAEILEKEGYILSFEI 50
>UniRef50_P56801 Cluster: Chloroplast 30S ribosomal protein S8;
n=118; Viridiplantae|Rep: Chloroplast 30S ribosomal
protein S8 - Arabidopsis thaliana (Mouse-ear cress)
Length = 134
Score = 32.7 bits (71), Expect = 3.8
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 336 GYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
G ++L+T GIM EAR K +GG+IL + +
Sbjct: 104 GIVILSTSQGIMTDREARLKRIGGEILCYIW 134
>UniRef50_A7PGU8 Cluster: Chromosome chr17 scaffold_16, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_16, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 93
Score = 32.3 bits (70), Expect = 5.0
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 336 GYLVLTTXGGIMXHEEARXKHLGGKIL 416
G ++L+T GIM EAR K +GG+IL
Sbjct: 2 GIVILSTSRGIMTDREARLKRIGGEIL 28
>UniRef50_A5KZR4 Cluster: Negative regulator of beta-lactamase
expression; n=1; Vibrionales bacterium SWAT-3|Rep:
Negative regulator of beta-lactamase expression -
Vibrionales bacterium SWAT-3
Length = 154
Score = 31.5 bits (68), Expect = 8.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +3
Query: 246 TKQCGVISPRFDVPINDIERWTNLLPSRQFGY 341
T C SP+ D+ +NDI RW R GY
Sbjct: 24 TVHCSATSPQQDIGVNDIRRWHKKRGWRDVGY 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 374,620,684
Number of Sequences: 1657284
Number of extensions: 6115663
Number of successful extensions: 9522
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9508
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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