Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0517.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   0.71 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   2.8  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   6.6  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   6.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   6.6  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    22   8.7  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 0.71
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 150 LNDDFGTGPDEDLSFPSLFS 91
           L DDF TGPD + + P++FS
Sbjct: 610 LRDDFPTGPDPNFN-PNIFS 628


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 2.8
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +1

Query: 40  AMVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKV 141
           A+  +N+L+ +      A+KR + Q L+R C K+
Sbjct: 598 ALRTLNLLNRSTDHALLAQKRQEHQRLVRECDKI 631


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 279 DVPINDIERWTN 314
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 279 DVPINDIERWTN 314
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 6.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 323 GEQISPSFNIVDGNIKTR*NDTTLFSXPVRFTTXXPAL*SSTISNS 186
           GE+          +++++ N+TT+ S P   TT   +  SS+ S+S
Sbjct: 515 GERFQDLGPAASESVRSQSNNTTVVSTPSSSTTSSSSTTSSSSSSS 560


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 282 VPINDIERWTNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKIL 416
           V +ND+ERW + +        VL   G  +  +E R   + G ++
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGIDILGDVV 348


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,919
Number of Sequences: 2352
Number of extensions: 6660
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)