Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0517.Seq
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a ... 114 2e-25
BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a ... 114 2e-25
BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a ... 114 2e-25
BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a ... 114 2e-25
BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a ... 114 2e-25
AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein. 114 2e-25
AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein. 114 2e-25
X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a pr... 113 3e-25
X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homolog... 101 1e-21
BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for MG... 40 0.003
>BC105292-1|AAI05293.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>BC105273-1|AAI05274.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>BC046113-1|AAH46113.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>BC030569-1|AAH30569.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>BC001697-1|AAH01697.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 98.3 bits (234), Expect = 1e-20
Identities = 44/60 (73%), Positives = 50/60 (83%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPR DV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRSDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>AY208299-1|AAO48936.1| 130|Homo sapiens S15a protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>AB062400-1|BAB93487.1| 130|Homo sapiens OK/SW-cl.82 protein.
Length = 130
Score = 114 bits (274), Expect = 2e-25
Identities = 53/59 (89%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>X84407-1|CAA59127.1| 130|Homo sapiens ribosomal protein S15a
protein.
Length = 130
Score = 113 bits (271), Expect = 3e-25
Identities = 52/59 (88%), Positives = 57/59 (96%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK QVLIRPCSKVIV+ LT+MMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTLMMKHGYIGEFEIIDDHRAG 59
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 71 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
>X62691-1|CAA44568.1| 129|Homo sapiens ribosomal protein homologous
to yeast S24 protein.
Length = 129
Score = 101 bits (242), Expect = 1e-21
Identities = 45/60 (75%), Positives = 51/60 (85%), Gaps = 1/60 (1%)
Frame = +3
Query: 252 QCGVISPRFDVPINDIERW-TNLLPSRQFGYLVLTTXGGIMXHEEARXKHLGGKILGFFF 428
+CGVISPRFDV + D+E+W NLLPSRQFG++VLTT GIM HEEAR KH GGKILGFFF
Sbjct: 70 KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 129
Score = 83.0 bits (196), Expect = 4e-16
Identities = 42/59 (71%), Positives = 47/59 (79%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPCSKVIVKXLTVMMKHGYIGEFEIVDDHRAG 219
MVRMNVL+DALKSI+NAEKRGK + L+ LTVMMKHGYIGEFEI+DDHRAG
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRRCLLGRLQSHR-PVLTVMMKHGYIGEFEIIDDHRAG 58
>BC071775-1|AAH71775.1| 37|Homo sapiens Unknown (protein for
MGC:88417) protein.
Length = 37
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +1
Query: 43 MVRMNVLSDALKSIHNAEKRGKXQVLIRPC 132
MV MNVL+ ALKSI+N + RGK QVL R C
Sbjct: 1 MVHMNVLTIALKSINNVKTRGKHQVLRRLC 30
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,219,608
Number of Sequences: 237096
Number of extensions: 903878
Number of successful extensions: 993
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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