Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0515.Seq
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   3.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   3.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   7.1  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   9.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   9.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 277 PSRLLELYHKCCYH 236
           P RL     +CCYH
Sbjct: 605 PHRLAARSRRCCYH 618


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -2

Query: 277 PSRLLELYHKCCYH 236
           P RL     +CCYH
Sbjct: 497 PHRLAARSRRCCYH 510


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 295 PVDDTLPSRLLELYHK 248
           P  D LP+ LLEL ++
Sbjct: 463 PASDNLPTLLLELGYR 478


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 151 WNCIHKCCYRR 119
           W CI++ C RR
Sbjct: 58  WQCINQRCERR 68


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/38 (21%), Positives = 17/38 (44%)
 Frame = -2

Query: 283 TLPSRLLELYHKCCYHRMXWIPRCLSLNQCYWNCRWMI 170
           T P  ++  Y +  Y     +P C +L   +W+  + +
Sbjct: 202 TSPMLVIAEYKQLDYFDGSKVPACHTLANTFWSALYFL 239


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 4/15 (26%), Positives = 11/15 (73%)
 Frame = -2

Query: 178 WMIHFHHDCWNCIHK 134
           +M+H ++  W C+++
Sbjct: 152 FMLHCNNTTWRCLYR 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,168
Number of Sequences: 336
Number of extensions: 1549
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)