Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0515.Seq
         (449 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   2.2  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    22   8.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   8.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   8.7  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 170 YHPPAVPVTLIQTQTARDPVHPVVAALMVQFQQ 268
           Y PP +   L Q Q  R P   VVA    Q QQ
Sbjct: 339 YQPPQMRQQLQQQQQQRQPQRYVVAGSSQQQQQ 371


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 73  NCRWMIRVHHDAWSYIRKCCYRR 5
           NCR   R +H + +  R+ CY++
Sbjct: 151 NCRTAARRNHSSRNTCRRNCYQQ 173


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 287 IHRLFQXHXIQTQTXRDPXHPVVAALMDXVPTVXMEVYXPPAS 415
           +H     H   +Q+ R P H   +A    VPT+      P A+
Sbjct: 30  LHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAA 72


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 8.7
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 287 IHRLFQXHXIQTQTXRDPXHPVVAALMDXVPTVXMEVYXPPAS 415
           +H     H   +Q+ R P H   +A    VPT+      P A+
Sbjct: 30  LHSADVPHSSTSQSSRRPQHSSTSASSSSVPTLPTTSGEPRAA 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.131    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,543
Number of Sequences: 2352
Number of extensions: 5949
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38268990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)