Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0515.Seq
(449 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB037780-1|BAA92597.1| 517|Homo sapiens KIAA1359 protein protein. 33 0.45
AB098733-1|BAD06720.1| 560|Homo sapiens transmembrane mucin MUC... 32 1.0
BC029267-1|AAH29267.1| 555|Homo sapiens MUC20 protein protein. 31 2.4
BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8 d... 30 4.2
AJ406938-1|CAC27577.1| 109|Homo sapiens keratin associated prot... 30 4.2
AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens ... 29 7.3
>AB037780-1|BAA92597.1| 517|Homo sapiens KIAA1359 protein protein.
Length = 517
Score = 33.1 bits (72), Expect = 0.45
Identities = 16/80 (20%), Positives = 31/80 (38%)
Frame = +2
Query: 2 HPAVAALTDIAPGIVVDAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPP 181
HP + D HP P++ ++ + D +HP + + + + HP
Sbjct: 174 HPVITPSRASESSASSDGPHPVITPSRASESSASSDGLHPVITPSRASESSASSDGPHPV 233
Query: 182 AVPVTLIQTQTARDPVHPVV 241
P ++ + D HPV+
Sbjct: 234 ITPSRASESSASSDGPHPVI 253
Score = 32.7 bits (71), Expect = 0.60
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +2
Query: 2 HPAVAALTDIAPGIVVDAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPP 181
HP + D HP P++ ++ + D HP + + + + HP
Sbjct: 193 HPVITPSRASESSASSDGLHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPV 252
Query: 182 AVPVTLIQTQTARDPVHPVV 241
P ++ + D HPV+
Sbjct: 253 ITPSRASESSASSDGPHPVI 272
Score = 31.9 bits (69), Expect = 1.0
Identities = 14/64 (21%), Positives = 28/64 (43%)
Frame = +2
Query: 50 DAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPV 229
D+ HP P++ ++ + D HP + + + + HP P ++ + D
Sbjct: 171 DSPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGLHPVITPSRASESSASSDGP 230
Query: 230 HPVV 241
HPV+
Sbjct: 231 HPVI 234
>AB098733-1|BAD06720.1| 560|Homo sapiens transmembrane mucin MUC20S
protein.
Length = 560
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +2
Query: 2 HPAVAALTDIAPGIVVDAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPP 181
HP + D HP P++ ++ + D HP + + + + HP
Sbjct: 149 HPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPV 208
Query: 182 AVPVTLIQTQTARDPVHPVV 241
P ++ + D HPV+
Sbjct: 209 ITPSRASESSASSDGPHPVI 228
Score = 31.9 bits (69), Expect = 1.0
Identities = 16/80 (20%), Positives = 30/80 (37%)
Frame = +2
Query: 2 HPAVAALTDIAPGIVVDAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPP 181
HP + D HP P++ ++ + D HP + + + + HP
Sbjct: 168 HPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPV 227
Query: 182 AVPVTLIQTQTARDPVHPVV 241
P ++ + D HPV+
Sbjct: 228 ITPSRASESSASSDGPHPVI 247
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +2
Query: 50 DAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPV 229
D HP P++ ++ + D HP + + + + HP P ++ + D
Sbjct: 146 DGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGP 205
Query: 230 HPVV 241
HPV+
Sbjct: 206 HPVI 209
>BC029267-1|AAH29267.1| 555|Homo sapiens MUC20 protein protein.
Length = 555
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +2
Query: 50 DAYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTVVMEVYHPPAVPVTLIQTQTARDPV 229
D HP P++ ++ + D HP + + + + HP P ++ + D
Sbjct: 181 DGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGP 240
Query: 230 HPVV 241
HPV+
Sbjct: 241 HPVI 244
>BC030023-1|AAH30023.1| 440|Homo sapiens glycosyltransferase 8
domain containing 3 protein.
Length = 440
Score = 29.9 bits (64), Expect = 4.2
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -2
Query: 217 RCLSLNQCYWNCRWMIHFHHDCWNCIHKCCYR 122
RC + CYWN WM+ NC + +R
Sbjct: 74 RCKDFSLCYWNPYWMLPSDVCGMNCFWEAAFR 105
>AJ406938-1|CAC27577.1| 109|Homo sapiens keratin associated protein
4.6 protein.
Length = 109
Score = 29.9 bits (64), Expect = 4.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +2
Query: 53 AYHPPAVPAQLMQAQTA*DLVHPAVAALMDTVPTV--VMEVYHPPAVPVTLIQ 205
A P AVPA A A V+PA AA P V V PA P+ + Q
Sbjct: 35 ASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAESPATPLAIAQ 87
>AK098423-1|BAC05305.1| 485|Homo sapiens protein ( Homo sapiens
cDNA FLJ25557 fis, clone JTH02756. ).
Length = 485
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +2
Query: 122 AVAALMDTVPTVVMEVYHPPAVPVTLIQTQTA 217
+V ++ T+PT++M P V VT+IQT A
Sbjct: 384 SVMLILRTMPTLMMRTEDRPKVAVTMIQTAAA 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.317 0.131 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,139,318
Number of Sequences: 237096
Number of extensions: 850170
Number of successful extensions: 1924
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1917
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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