Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0512.Seq
(489 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 126 2e-28
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 113 2e-24
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 103 3e-21
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 98 8e-20
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 98 8e-20
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 87 1e-16
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 75 6e-13
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 73 5e-12
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 67 2e-10
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 62 5e-09
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 57 2e-07
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 56 4e-07
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 51 1e-05
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 47 3e-04
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 46 3e-04
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 46 3e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 44 0.002
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 42 0.007
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 38 0.12
UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1; ... 36 0.37
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 36 0.37
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 36 0.48
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 0.84
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 33 2.6
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 33 3.4
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 33 3.4
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 33 4.5
UniRef50_A6WF41 Cluster: Ribonuclease BN; n=1; Kineococcus radio... 32 6.0
UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.2... 32 6.0
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 32 6.0
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 32 6.0
UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-pro... 32 7.9
UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep: M... 32 7.9
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 32 7.9
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 126 bits (305), Expect = 2e-28
Identities = 61/70 (87%), Positives = 64/70 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM RLRHSQVRGISIKLQEEERERRDNYVP VSALE DIIEVD DTK+MLK+LDF+NI
Sbjct: 55 THLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNI 114
Query: 73 NGLQLTQPAT 44
GLQLTQP T
Sbjct: 115 RGLQLTQPNT 124
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/53 (64%), Positives = 36/53 (67%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRLTLDF TNKRICEE+AIIPTKPLRNKIAG+
Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGY 53
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 113 bits (273), Expect = 2e-24
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 103 bits (246), Expect = 3e-21
Identities = 44/70 (62%), Positives = 59/70 (84%)
Frame = -3
Query: 250 HLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 71
HLM+R+R VRGISIKLQEEERE RDNYVPE+S L+ + +EVDPDTK+ML++LDF +++
Sbjct: 56 HLMKRIRKGPVRGISIKLQEEERENRDNYVPEISVLDQETVEVDPDTKEMLELLDFVSLS 115
Query: 70 GLQLTQPATQ 41
LQ+T+P +
Sbjct: 116 NLQVTRPTVE 125
Score = 37.5 bits (83), Expect = 0.16
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
RL DF TNK +CE IAII +K LRNKI G+
Sbjct: 24 RLGNDFYTNKCVCE-IAIILSKKLRNKIVGY 53
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 98.3 bits (234), Expect = 8e-20
Identities = 43/67 (64%), Positives = 58/67 (86%)
Frame = -3
Query: 250 HLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 71
HLM+R++ VRGISIKLQE+ERER+DNYVPE+SA + + IEVDPDTK+M K+L+F +++
Sbjct: 110 HLMKRIQKDPVRGISIKLQEKERERKDNYVPEISATDQETIEVDPDTKEMRKVLNFVSLS 169
Query: 70 GLQLTQP 50
LQ+TQP
Sbjct: 170 NLQVTQP 176
Score = 33.5 bits (73), Expect = 2.6
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
+F +NKR CEE II +K L NKI G+
Sbjct: 81 NFCSNKRACEETTIILSKKLCNKIVGY 107
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 98.3 bits (234), Expect = 8e-20
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPE SAL+ +IIEVDPDTK ML + F +
Sbjct: 110 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEGSALDQEIIEVDPDTKKMLNLPGFGRL 169
Query: 73 NGLQLTQP 50
+ Q TQP
Sbjct: 170 SNFQDTQP 177
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
RL DF TNK +CEEIAIIP++ LRNKI +
Sbjct: 78 RLGNDFHTNKHVCEEIAIIPSENLRNKITSY 108
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 87.4 bits (207), Expect = 1e-16
Identities = 41/68 (60%), Positives = 55/68 (80%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THL ++++ VRGISIKLQEEER R +Y+PEVSAL+ +I EVDP TK+MLK+LD ++
Sbjct: 92 THLTKQIQRGPVRGISIKLQEEER--RADYIPEVSALDQEITEVDPATKEMLKLLDLGSL 149
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 150 SNLQVTQP 157
Score = 43.2 bits (97), Expect = 0.003
Identities = 18/31 (58%), Positives = 25/31 (80%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
RL DF T+K +CEEI I+P+K L++KIAG+
Sbjct: 60 RLGNDFYTDKHVCEEITIVPSKKLQSKIAGY 90
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 75.4 bits (177), Expect = 6e-13
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLMRR++ VRGIS+KLQEEERERR ++VPE SALE + I VD +T +ML L ++
Sbjct: 55 THLMRRIQRGPVRGISLKLQEEERERRMDFVPEKSALEVEEIRVDKETMEMLAALGMADL 114
Query: 73 NGLQLTQ 53
G++ Q
Sbjct: 115 PGVERQQ 121
Score = 54.4 bits (125), Expect = 1e-06
Identities = 25/53 (47%), Positives = 34/53 (64%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR +R+TLDF TNK++ EE++I+P+K LRNK+AGF
Sbjct: 1 MGRVRTKTVKKTSRQVIEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGF 53
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 72.5 bits (170), Expect = 5e-12
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = -3
Query: 265 CWICTHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
C+I HLMRR++ VRGIS+KLQEEERERR ++VPE S ++ +I+VD DT DML L
Sbjct: 65 CFII-HLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLK 123
Query: 85 FN 80
N
Sbjct: 124 LN 125
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 66.9 bits (156), Expect = 2e-10
Identities = 27/43 (62%), Positives = 39/43 (90%)
Frame = -3
Query: 178 RRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 50
+++ YVPEVSAL+ +IIEVDPDT++MLK+LDF +++ LQ+TQP
Sbjct: 122 KKETYVPEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
Score = 46.0 bits (104), Expect = 5e-04
Identities = 22/35 (62%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGF-AHI 247
RL F TNKR+CE+IAI P+K LRN IAG+ AH+
Sbjct: 72 RLGSHFHTNKRVCEDIAISPSKKLRNGIAGYVAHL 106
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 62.5 bits (145), Expect = 5e-09
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 95
THL++R++ V+GIS+K+QEEERERR +YVPE S+++ D + D D K ML+
Sbjct: 95 THLLKRIQTGSVKGISLKIQEEERERRLDYVPEKSSVDIDNLRGDQDVKRMLE 147
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGFA 253
+LT DF NK+I E+ +P+K LRNKIAGFA
Sbjct: 63 KLTSDFHFNKKILSEVGQVPSKKLRNKIAGFA 94
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 56.8 bits (131), Expect = 2e-07
Identities = 23/36 (63%), Positives = 33/36 (91%)
Frame = -3
Query: 157 EVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 50
+VSAL+ ++IEVDPDTK+MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 56.0 bits (129), Expect = 4e-07
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 3/59 (5%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDI---IEVDPDTKDMLKMLD 86
TH+M+RL VRGIS+KLQEEERERR ++ P S ++ I + VD T ML+ L+
Sbjct: 55 THIMKRLARGPVRGISLKLQEEERERRMDHAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
Score = 36.7 bits (81), Expect = 0.28
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF-AHI 247
MG++R ++L DF NKR+ ++ I +K L+NKIAG+ HI
Sbjct: 1 MGKIRTKTVKRASRQVVEKYYSKLNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHI 57
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 51.2 bits (117), Expect = 1e-05
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+ +R S + +S R R NYVPE S L+ +I EVD TK+MLK+ F ++
Sbjct: 55 THLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPEGSVLDQEITEVDAGTKEMLKLPGFGSV 113
Query: 73 N 71
+
Sbjct: 114 S 114
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 46.8 bits (106), Expect = 3e-04
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MG+VR LT+DF NK C+EIA+I +K LRNKIAG+
Sbjct: 1 MGKVRTKTIKRSAKYIFIKYFKHLTIDFQENKFFCDEIALITSKSLRNKIAGY 53
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 46.4 bits (105), Expect = 3e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLK 95
T L +++ + IK EEERER++N +P+ S L+ D +EVD T +M+K
Sbjct: 55 TSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIK 107
Score = 32.3 bits (70), Expect = 6.0
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = -1
Query: 348 RLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
RL FD N + +++A++ +K L+N+IAG+
Sbjct: 23 RLDSTFDHNLLVVQDVAVVQSKKLKNEIAGY 53
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 46.4 bits (105), Expect = 3e-04
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGR+R T DF+TNKR+ EE+A I TK LRN+IAG+
Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGY 53
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MG +R + T DFDTNK++ EE + + TK LRNKIAG+
Sbjct: 1 MGNIRTSFVKRIAKEMIETHPGKFTDDFDTNKKLVEEFSTVSTKHLRNKIAGY 53
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 41.9 bits (94), Expect = 0.007
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAG 259
+F NKR+C+EIAIIP+K LRNK AG
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAG 46
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 37.9 bits (84), Expect = 0.12
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MG VR T+DF+ NK+ EIA IP++ LRN+IAG+
Sbjct: 1 MGNVRSKLVKRTAKMLVEQYPDAFTVDFELNKKKLMEIADIPSRQLRNQIAGY 53
>UniRef50_A5DJQ3 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 606
Score = 36.3 bits (80), Expect = 0.37
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 217 RGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQPATQ 41
R I L +ER + + ++ ++ I++ P T ML FNNI+G QP TQ
Sbjct: 112 RQFQIHLARQERIKESQTLYHINRFDNSIVQKPPRTSYMLSPHTFNNISGNTKHQPPTQ 170
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 36.3 bits (80), Expect = 0.37
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MG+VR LT DF+ NK++ E +A TK LRN IAG+
Sbjct: 1 MGKVRPTFVKRPAREIVEKYEEYLTTDFEHNKKVVEIVARPKTKKLRNMIAGY 53
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 35.9 bits (79), Expect = 0.48
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MG+VR T DF+ NKRI ++ P+K LRN+IAG+
Sbjct: 1 MGKVRIGLVKRTARKLVEMYPDIFTEDFEHNKRIVSQLIETPSKKLRNQIAGY 53
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 35.1 bits (77), Expect = 0.84
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF-AHI**G 238
MG+VR T DF+ NKR+ ++ +K LRN+IAG+ H+
Sbjct: 1 MGKVRIRLVKRTARKLLEKYPDLFTGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLVNM 60
Query: 237 VSDTRKCEES 208
S +K EE+
Sbjct: 61 ASKRKKAEEA 70
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 33.5 bits (73), Expect = 2.6
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
DF NK+I E++I+ +K L+N+IAG+
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGY 48
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 33.1 bits (72), Expect = 3.4
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 212 SSHLRVSETPH*MCA-NPAILFLRGLVGMIAISSHILLFVSKSSVNLV*YFSIIIFAXFL 388
SS+ + P +C PAILFL L+ SS LF SKSSV+ F+ FA F
Sbjct: 5 SSNSGSATFPFFLCVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVHSATSFN-SCFASFF 63
Query: 389 TVLVRTRP 412
T + T P
Sbjct: 64 TYVGLTVP 71
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 33.1 bits (72), Expect = 3.4
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
+FD NK++ EI I +K +RN++AG+
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGY 52
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 32.7 bits (71), Expect = 4.5
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 342 TLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
T +FD NKR+ E+ I +K +RN++AG+
Sbjct: 25 TGNFDENKRLVAELTNIQSKTVRNRVAGY 53
>UniRef50_A6WF41 Cluster: Ribonuclease BN; n=1; Kineococcus
radiotolerans SRS30216|Rep: Ribonuclease BN -
Kineococcus radiotolerans SRS30216
Length = 357
Score = 32.3 bits (70), Expect = 6.0
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +2
Query: 110 GVGVYFDDVMFESRHFWDIVVTPLTLLFLKFD-----RDSSHLRVSETPH*MCANPAILF 274
G G+Y D+ + + W +VV+ T LF R+S + P N ++
Sbjct: 96 GTGIYIDEFIQGTALTWSLVVSTATFLFTGLGWMDGMRESIRAVFGDPPG--GGNLVVVR 153
Query: 275 LRGLVGMIAISSHILLFVS 331
LR L+GM+ + S + L V+
Sbjct: 154 LRDLLGMLVVGSGVALSVA 172
>UniRef50_Q9FRI5 Cluster: Putative uncharacterized protein F4F7.25;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F4F7.25 - Arabidopsis thaliana (Mouse-ear cress)
Length = 790
Score = 32.3 bits (70), Expect = 6.0
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERE-RRDNYVPEVSALEHDIIEVDPDTKDML 98
T L+ H + + I LQ+ +E RR YVP+ S + HD +E D +DML
Sbjct: 668 TFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHD-VESDGHKEDML 719
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
DF NK E++A + TK +RN+IAG+
Sbjct: 27 DFTANKAKVEQLASVQTKEVRNRIAGY 53
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 32.3 bits (70), Expect = 6.0
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
DF+ NK + EE+ I +K +RN+IAG+
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGY 52
>UniRef50_UPI0000E48CF7 Cluster: PREDICTED: similar to Brms1l-prov
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Brms1l-prov protein -
Strongylocentrotus purpuratus
Length = 318
Score = 31.9 bits (69), Expect = 7.9
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = -3
Query: 235 LRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNIN 71
LR ++ I KLQ EE+ R+N+ E S L D+++ D D K D +NI+
Sbjct: 121 LRELRMENIRNKLQSEEKASRENHESEKSLL-RDLMKADLDEKIRRLEEDRHNID 174
>UniRef50_Q9EZA9 Cluster: Mob/Pre; n=1; Bacillus coagulans|Rep:
Mob/Pre - Bacillus coagulans
Length = 474
Score = 31.9 bits (69), Expect = 7.9
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = -3
Query: 232 RHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDML----KMLDF-NNIN 71
+H Q +G I+ +EE ER+ VPE + + +V +TK++ ++ +F NN+N
Sbjct: 164 KHLQEKGFEIQRGKEESERKHLSVPEYKEAKEEAKKVKEETKELASKASQLAEFHNNVN 222
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.9 bits (69), Expect = 7.9
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = -3
Query: 223 QVRGISIKLQEEERERRDNYVPEVSALEHDIIEV 122
+VRG+++ + E+E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,015,379
Number of Sequences: 1657284
Number of extensions: 7350525
Number of successful extensions: 19656
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 19236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19647
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 28019067077
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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