Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0512.Seq
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...   119   6e-29
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   0.80 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   2.4  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   4.2  
AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like precu...    23   5.6  

>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score =  119 bits (286), Expect = 6e-29
 Identities = 58/68 (85%), Positives = 63/68 (92%)
 Frame = -3

Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
           THLM+RLRHSQVRGISIKLQEEERERRDNYVP+VSALE DIIEVDP+TK+MLK LDFNNI
Sbjct: 55  THLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI 114

Query: 73  NGLQLTQP 50
             +QLT P
Sbjct: 115 -VVQLTNP 121



 Score = 66.5 bits (155), Expect = 5e-13
 Identities = 34/53 (64%), Positives = 36/53 (67%)
 Frame = -1

Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
           MGRVR                TRLT+DFDTNKRI EE+AIIPTKPLRNKIAGF
Sbjct: 1   MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGF 53


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 0.80
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = -3

Query: 268 NCWICTHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALE-HDIIEVDPDTKDMLKM 92
           N W  T L          G + +L+EEE + +  + PE+   E  + ++V  + K+M+ +
Sbjct: 69  NKWRNTTLDEICADFDANGTTCELEEEEVDLQAKHAPEMDGSELMEAVDVAAELKNMV-L 127

Query: 91  LDFNN 77
            D +N
Sbjct: 128 QDISN 132


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = -1

Query: 237 VSDTRKCEESLSNFRKRSVRGVTTMSQKCLLSNMTS 130
           +++TR C E++S F+    R   T+ +K  + + TS
Sbjct: 356 INETRVCGENISTFQLEERRRRRTVIEKLNIEDGTS 391


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 136 DIIEVDPDTKDMLKMLDFNNINGL 65
           DI +VDPD    L  +  NNI G+
Sbjct: 636 DIEDVDPDLHRSLTWILENNITGI 659


>AY994089-1|AAX86002.1|  267|Anopheles gambiae hyp37.7-like
           precursor protein.
          Length = 267

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 251 CANPAILFLRGLVG 292
           CA+P++LF RG  G
Sbjct: 209 CADPSLLFARGTEG 222


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,394
Number of Sequences: 2352
Number of extensions: 7758
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)