Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0512.Seq
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 113 2e-25
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 113 2e-25
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 113 2e-25
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 113 2e-25
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 108 9e-24
BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein. 29 6.5
BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein. 29 6.5
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 29 6.5
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 29 6.5
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 29 6.5
M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein... 29 8.6
CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein. 29 8.6
BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding prote... 29 8.6
AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein pr... 29 8.6
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 113 bits (273), Expect = 2e-25
Identities = 51/68 (75%), Positives = 62/68 (91%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM+R++ VRGISIKLQEEERERRDNYVPEVSAL+ +IIEVDPDTK+MLK+LDF ++
Sbjct: 55 THLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 56.8 bits (131), Expect = 4e-08
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -1
Query: 414 MGRVRXXXXXXXXXXXXXXXXTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGF 256
MGRVR TRL DF TNKR+CEEIAIIP+K LRNKIAG+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGY 53
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 108 bits (260), Expect = 9e-24
Identities = 48/68 (70%), Positives = 60/68 (88%)
Frame = -3
Query: 253 THLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNI 74
THLM++++ VRGISIKLQEE RERRDNYVPE+SAL+ +IIEVDPDTK+MLK+LDF +
Sbjct: 55 THLMKQIQRGPVRGISIKLQEEVRERRDNYVPEISALDQEIIEVDPDTKEMLKLLDFGGL 114
Query: 73 NGLQLTQP 50
+ LQ+TQP
Sbjct: 115 SNLQVTQP 122
Score = 43.6 bits (98), Expect = 4e-04
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -1
Query: 336 DFDTNKRICEEIAIIPTKPLRNKIAGF 256
DF TNK +C+EIAIIP+K L NK AG+
Sbjct: 27 DFHTNKHMCKEIAIIPSKKLHNKTAGY 53
>BC128593-1|AAI28594.1| 405|Homo sapiens CCDC4 protein protein.
Length = 405
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 196 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>BC128592-1|AAI28593.1| 312|Homo sapiens CCDC4 protein protein.
Length = 312
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 196 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 183 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 219
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 196 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 234 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 270
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 196 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 29.5 bits (63), Expect = 6.5
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 196 QEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLD 86
+EEE E + Y P LE ++I + + +++ + L+
Sbjct: 308 EEEEEEDEEGYCPRCQELEQEVISLQQENEELRRKLE 344
>M55543-1|AAA67323.1| 591|Homo sapiens guanylate binding protein
isoform II protein.
Length = 591
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -3
Query: 238 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 101
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>CR457062-1|CAG33343.1| 591|Homo sapiens GBP2 protein.
Length = 591
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -3
Query: 238 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 101
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>BC073163-1|AAH73163.1| 591|Homo sapiens guanylate binding protein
2, interferon-inducible protein.
Length = 591
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -3
Query: 238 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 101
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
>AL832451-1|CAD89925.1| 591|Homo sapiens hypothetical protein
protein.
Length = 591
Score = 29.1 bits (62), Expect = 8.6
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = -3
Query: 238 RLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDM 101
+L Q + +++KLQE+ER ++ + E L+ DI ++ +K +
Sbjct: 539 QLMAEQEKTLALKLQEQERLLKEGFENESKRLQKDIWDIQMRSKSL 584
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,126,432
Number of Sequences: 237096
Number of extensions: 1102889
Number of successful extensions: 6544
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 6429
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6541
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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