Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0508.Seq
         (499 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   3.5  
X98401-1|CAA67051.1|  398|Drosophila melanogaster phosphotyrosyl...    29   4.6  
AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-P...    28   6.1  
AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-P...    28   6.1  
AY060614-1|AAL28162.1|  398|Drosophila melanogaster GH04025p pro...    28   8.1  
AE014134-597|AAF51115.1|  398|Drosophila melanogaster CG3289-PA ...    28   8.1  

>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 146 NPGKLSSCQTKPALAMVINDNIKRN 72
           NP K S   TKP    +IND +KRN
Sbjct: 599 NPAKKSPAVTKPNYRALINDMLKRN 623


>X98401-1|CAA67051.1|  398|Drosophila melanogaster phosphotyrosyl
           phosphatase activatorprotein.
          Length = 398

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 34  LKPFNRLIMAFTKFLFMLSLITIASAGFVWQDDNFPGFPSDMWPSIQIPTIPPFDP 201
           L+ FNR +    +     ++    S G VW  D+F   P  +W S Q+    PFDP
Sbjct: 171 LRRFNRYLEVARQLQRTYNMEPAGSQG-VWSLDDFQFVPF-IWGSAQLAVKSPFDP 224


>AE013599-1071|AAF58809.3| 1350|Drosophila melanogaster CG12908-PA,
           isoform A protein.
          Length = 1350

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = -3

Query: 251 FLMLSGEGNEKAKFGILGSNGGIVGIC------IEGHISLGNPGKLSSCQTKPALAM 99
           F  L+G G+E A+F    +N G+ G+       IE   ++ +P    S    PALA+
Sbjct: 227 FYTLNGSGSENARFLSESTNLGVPGVWLFEVAPIENEQNVRSPDNAESLTESPALAL 283


>AE013599-1070|AAS64880.1| 1370|Drosophila melanogaster CG12908-PB,
           isoform B protein.
          Length = 1370

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
 Frame = -3

Query: 251 FLMLSGEGNEKAKFGILGSNGGIVGIC------IEGHISLGNPGKLSSCQTKPALAM 99
           F  L+G G+E A+F    +N G+ G+       IE   ++ +P    S    PALA+
Sbjct: 227 FYTLNGSGSENARFLSESTNLGVPGVWLFEVAPIENEQNVRSPDNAESLTESPALAL 283


>AY060614-1|AAL28162.1|  398|Drosophila melanogaster GH04025p
           protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 34  LKPFNRLIMAFTKFLFMLSLITIASAGFVWQDDNFPGFPSDMWPSIQIPTIPPFDP 201
           L+ FNR +    +     ++    S G VW  D+F   P  +W S Q+    PFDP
Sbjct: 171 LRLFNRYLELARQLQRTYNMEPAGSQG-VWSLDDFQFVPF-IWGSAQLAVKSPFDP 224


>AE014134-597|AAF51115.1|  398|Drosophila melanogaster CG3289-PA
           protein.
          Length = 398

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = +1

Query: 34  LKPFNRLIMAFTKFLFMLSLITIASAGFVWQDDNFPGFPSDMWPSIQIPTIPPFDP 201
           L+ FNR +    +     ++    S G VW  D+F   P  +W S Q+    PFDP
Sbjct: 171 LRLFNRYLELARQLQRTYNMEPAGSQG-VWSLDDFQFVPF-IWGSAQLAVKSPFDP 224


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,711,634
Number of Sequences: 53049
Number of extensions: 452699
Number of successful extensions: 1126
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1126
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)