Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0505.Seq
         (528 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0131 - 1013982-1016246                                           28   4.0  
10_08_0684 - 19870715-19872994                                         27   9.3  

>03_01_0131 - 1013982-1016246
          Length = 754

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -1

Query: 249 ISYMLSHTRIEFE-QPTEEQAESVVAEPDFIFNKPYFFMTLNQYNTPGFVGL 97
           I Y  SH    F  Q T+++AE++  +   I   P  F+ L   ++PGF+GL
Sbjct: 72  IIYSYSHVLSGFAAQLTDDEAEAMRKKEGCIRLYPEEFLPLATTHSPGFLGL 123


>10_08_0684 - 19870715-19872994
          Length = 759

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 204 TEEQAESVVAEPDFIFNKPYFFMTLNQYNTPGFVGL 97
           T+E+AE+V A    +   P  F+ L    +PGF+GL
Sbjct: 95  TDEEAEAVRATAGCLRLYPEEFLPLATTRSPGFLGL 130


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,535,597
Number of Sequences: 37544
Number of extensions: 189315
Number of successful extensions: 355
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)